[FLASH-USERS] FLASH4.3 compiling error

Mehrnoosh Tahani mtahani at ucalgary.ca
Fri Jun 9 19:01:30 EDT 2017


Hello there,


I am new to FLASH and I'm trying to compile and run FLASH4.3 on SciNet(GPC)<https://wiki.scinet.utoronto.ca/wiki/index.php/GPC_Quickstart>. When I do 'make' in the object folder I receive the following error message:


mpicc -I /scinet/gpc/Libraries/HDF5-1.8.11/v18-openmpi-intel/include -c -g   -DMAXBLOCKS=500 -DNXB=8 -DNYB=8 -DNZB=8 -DN_DIM=3 io_h5_attribute.c

io_h5_attribute.c(48): error #165: too few arguments in function call

      dsetID = H5Dopen(hFileID, datasetName);

                                           ^


io_h5_attribute.c(55): error #165: too few arguments in function call

         attDataspace, H5P_DEFAULT);

                                  ^


io_h5_attribute.c(101): error #165: too few arguments in function call

      dsetID = H5Dopen(hFileID, datasetName);

                                           ^


compilation aborted for io_h5_attribute.c (code 2)

make: *** [io_h5_attribute.o] Error 2

I tried all the available versions of HDF5 and gcc in SciNet but I got the same error with each of them. I have FLASH working on my Mac with an old version of gcc which is not available on SciNet.

I found here<http://flash.uchicago.edu/pipermail/flash-users/2013-September/001354.html> that my compilation command is probably not pointing to the right include directory for HDF5 headers. But I couldn't find anything wrong with the path. Could you please help me on this? (http://flash.uchicago.edu/pipermail/flash-users/2013-September/001354.html)

Many thanks,

Mehrnoosh

~~~~~~~~~~~~~~~~~~~~~~~~~~~
Mehrnoosh Tahani, MSc. (Physics)
PhD Student, Astrophysics
Department of Physics & Astronomy
University of Calgary

mtahani at ucalgary.ca
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