[FLASH-USERS] Laser Problem - Error from HYPRE

[Sai Siva]

Hi Klaus,

Thank you for your suggestion.

Yes, I have compiled and installed *mpich, hdf5 and hypre* in my *home*
directory.

I have reconfigured and build *mpich, hdf5 and hypre* libraries again
following your suggestion. This time I found some problems with *hdf5*.

Finally, I succeeded after doing the following steps:

1) Uninstalled *mpich* from *home* and installed it the root by the command
lines:

*sudo apt-get install mpi-default-dev    sudo apt-get install openmpi-bin*

  The installed *mpicc, mpiexec* was in */usr/bin/*

2) Then I Configured *hdf5 to work as parallel* in the home directory by
the following command lines:


CC=/usr/bin/mpicc ./configure --enable-parallel
--prefix=/home/FLASH_Code/HDF5/hdf5_parallel

make

make check

make install


Finally, it worked.


On Fri, Apr 26, 2019, 7:41 PM Klaus Weide <klaus at flash.uchicago.edu> wrote:

> On Fri, 26 Apr 2019, Sai Siva wrote:
>
> > Dear All Users,
> >
> > I have recently upgraded Ubuntu from *14.04 to 18.04*.
> >
> > After up gradation I tried to run the laser related problem, but end up
> > with getting some errors related to *HYPRE*:
> >
> > The sample of the error is shown below:
> >
> > */home/hypre/hypre-2.10.1/src/hypre/lib/libHYPRE.a(LoadBal.o): In
> function
> > `LoadBalRecipSend':LoadBal.c:(.text+0x79c): undefined reference to
> >
> `ompi_mpi_double'/home/hypre/hypre-2.10.1/src/hypre/lib/libHYPRE.a(LoadBal.o):
> > In function `LoadBalDonorRecv':LoadBal.c:(.text+0x8e7): undefined
> reference
> > to `ompi_mpi_double'LoadBal.c:(.text+0x911): undefined reference to
> > `ompi_mpi_double'collect2: error: ld returned 1 exit statusMakefile:353:
> > recipe for target 'flash4' failedmake: *** [flash4] Error 1*
>
> What is the origin of the following components on your system?
>
>  *  MPI implementation (for development)
>     (a) provided by an Ubuntu package
>     (b) compiled and installed by you
>
>  *  HYPRE library
>     (a) provided by an Ubuntu package
>     (b) compiled and installed by you
>
> Based on the information you have given, it appears most likely that your
> HYPRE library was (b) compiled and installed by you, and you need to do
> that again after upgrading Ubuntu.
>
> Klaus
>
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