Hi Shravan,<div><br></div><div>Thank you very much !! I had not done that while launching visit..</div><div><br></div><div>Now, I am able to open the output files. Thanks a lot !!</div><div><br></div><div>Regards,</div><div>

Kunal<br><br><div class="gmail_quote">On Mon, Jun 28, 2010 at 2:33 PM, Shravan Kumar <span dir="ltr"><<a href="mailto:shravang@flash.uchicago.edu">shravang@flash.uchicago.edu</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex;">

<br>
Hi Kunal,<br>
<br>
Did you try using -assume_format FLASH while launching visit.<br>
<br>
visit -assume_format FLASH<br>
<br>
Regards,<br><font color="#888888">
Shravan</font><div><div></div><div class="h5"><br>
<br>
On Mon, 28 Jun 2010, Kunal Rao wrote:<br>
<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
I provided the read permissions to the output file. Now, I get the following<br>
message when opening:<br>
<br>
--------------------------------------------------------<br>
<br>
VisIt could not read from the file<br>
"/home/kunalgrao/Desktop/downloads/FLASH3.2/object/sedov_hdf5_chk_*<br>
database".<br>
<br>
The generated error message was:<br>
<br>
There was an error opening<br>
/home/kunalgrao/Desktop/downloads/FLASH3.2/object/sedov_hdf5_chk_* database.<br>
It may be an invalid file. VisIt tried using the following file format<br>
readers to open the file: Silo<br>
<br>
-----------------------------------------------------------<br>
<br>
Thanks & Regards,<br>
Kunal<br>
<br>
On Mon, Jun 28, 2010 at 1:12 PM, Kunal Rao <<a href="mailto:kunalgrao@gmail.com" target="_blank">kunalgrao@gmail.com</a>> wrote:<br>
<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
Hi Alex,<br>
<br>
Thanks for your reply.<br>
<br>
My output files from FLASH3.2 simulations are as follows:<br>
sedov.dat<br>
sedov.log<br>
sedov_hdf5_chk_0000<br>
sedov_hdf5_chk_0001<br>
sedov_hdf5_chk_0002<br>
sedov_hdf5_chk_0003<br>
sedov_hdf5_chk_0004<br>
sedov_hdf5_chk_0005<br>
sedov_hdf5_plt_cnt_0000<br>
sedov_forced_hdf5_plt_cnt_0000<br>
<br>
I have installed visit 2.0.0 and am able to open the visit gui. When I open<br>
one of the above mentioned output files, I get the following message:<br>
<br>
-------------------------------------------------------------------------<br>
<br>
VisIt could not read from the file<br>
"/home/kunalgrao/Desktop/downloads/FLASH3.2/object/sedov_hdf5_chk_*<br>
database".<br>
<br>
The generated error message was:<br>
<br>
There was an error opening<br>
/home/kunalgrao/Desktop/downloads/FLASH3.2/object/sedov_hdf5_chk_* database.<br>
It may be an invalid file. VisIt tried using the following file format<br>
readers to open the file: <No suitable plugins were identified><br>
<br>
The file format reader issued the following error message, which may (or<br>
may not) be indicative of the problem:<br>
<br>
No read permissions for<br>
/home/kunalgrao/Desktop/downloads/FLASH3.2/object/sedov_hdf5_chk_0000.<br>
<br>
<br>
-------------------------------------------------------------------------------------<br>
<br>
Can you please tell me how it works without having to manually build any<br>
plugin?<br>
<br>
Thanks & Regards,<br>
Kunal<br>
<br>
<br>
<br>
On Mon, Jun 28, 2010 at 12:07 PM, Alexander Wagner <<br>
<a href="mailto:alexander.y.wagner@googlemail.com" target="_blank">alexander.y.wagner@googlemail.com</a>> wrote:<br>
<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
Hi Kunal,<br>
<br>
I was always under the impression that the plugins were already shipped in<br>
VisIt. At least for me, VisIt works with FLASH3.2 data files without having<br>
to manually build the plugins.<br>
<br>
Best wishes,<br>
Alex<br>
<br>
<br>
<br>
On 06/29/2010 01:30 AM, Kunal Rao wrote:<br>
<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
Hi<br>
<br>
I am trying to get the VisIt tool working on Ubuntu 9.10 for FLASH. I<br>
have the visit tool installed and am trying to add the 1st plugin (out of 2<br>
as mentioned on <a href="http://flash.uchicago.edu/website/codesupport/visit/" target="_blank">http://flash.uchicago.edu/website/codesupport/visit/</a> )<br>
so as to view the output files produced by FLASH.<br>
<br>
There are 3 steps involved in adding the 1st plugin. I did the first 2<br>
i.e.<br>
xml2info -clobber FLASH.xml<br>
xml2makefile -clobber FLASH.xml<br>
<br>
but the third one i.e. make is giving me an error. This is what I get<br>
when I do the make:<br>
<br>
<br>
-----------------------------------------------------------------------------------------------------------------<br>
<br>
root@kunalgrao-laptop:~/Desktop/installs/FLASH# make<br>
HDF5_INCLUDE=-I/home/kunalgrao/Desktop/installs/hdf5/include<br>
HDF5_LIB=-L/home/kunalgrao/Desktop/installs/hdf5/libs/libhdf5.a |tee<br>
make.log<br>
<br>
<br>
****************************************************************************<br>
*** Building FLASH Database Plugin<br>
<br>
****************************************************************************<br>
source='avtFLASHFileFormat.C' object='avtFLASHFileFormat.o' libtool=no<br>
     \<br>
   depfile='./avtFLASHFileFormat.d'<br>
 tmpdepfile='./avtFLASHFileFormat.tmp_d' \<br>
   depmode=gcc3 /usr/local/visit/1.11.2/linux-intel/bin/depcomp<br>
 \<br>
   g++ -D_LARGEFILE64_SOURCE -Wno-deprecated -O2<br>
-I/home/kunalgrao/Desktop/installs/hdf5/include<br>
-I/misc/gapps/mpich/1.2.4/Linux/serial/64/debug/include<br>
 -I/usr/local/visit/1.11.2/linux-intel/include/cognomen<br>
-I/usr/local/visit/1.11.2/linux-intel/include/vtk<br>
-I/usr/local/visit/1.11.2/linux-intel/include/vtk/Common<br>
-I/usr/local/visit/1.11.2/linux-intel/include/vtk/Filtering<br>
-I/usr/local/visit/1.11.2/linux-intel/include/vtk/Graphics<br>
-I/usr/local/visit/1.11.2/linux-intel/include/vtk/Hybrid<br>
-I/usr/local/visit/1.11.2/linux-intel/include/vtk/IO<br>
-I/usr/local/visit/1.11.2/linux-intel/include/vtk/Imaging<br>
-I/usr/local/visit/1.11.2/linux-intel/include/vtk/Rendering<br>
-I/usr/local/visit/1.11.2/linux-intel/include/vtk/Utilities -I.<br>
-I/home/kunalgrao/Desktop/installs/mpich/include<br>
-I/usr/local/visit/1.11.2/linux-intel/include<br>
-I/usr/local/visit/1.11.2/linux-intel/include/visit<br>
-I/usr/local/visit/1.11.2/linux-intel/include/python -c avtFLASHFileFormat.C<br>
-o avtFLASHFileFormat.o<br>
avtFLASHFileFormat.C: In member function ‘vtkPolyData*<br>
avtFLASHFileFormat::GetMortonCurveSubset(int)’:<br>
avtFLASHFileFormat.C:1058: error: no matching function for call to<br>
‘find(__gnu_cxx::__normal_iterator<int*, std::vector<int,<br>
std::allocator<int> > >, __gnu_cxx::__normal_iterator<int*, std::vector<int,<br>
std::allocator<int> > >, int&)’<br>
make: *** [avtFLASHFileFormat.o] Error 1<br>
<br>
--------------------------------------------------------------------------------------------------------------<br>
<br>
I am also attaching the Makefile for your reference. Kindly let me know<br>
how to get it right.<br>
<br>
Thanks & Regards,<br>
Kunal<br>
<br>
<br>
<br>
----------------------------------------------------------------------------------------------------<br>
<br>
<br>
</blockquote></blockquote>
<br>
</blockquote>
</blockquote>
</div></div></blockquote></div><br></div>