Hello<div><br></div><div> I am trying to execute all the 'out of the box' simulations and unit Tests from the Simulation folder in FLASH 3.2. I am able to successfully run all of them except 4</div><div> simulations and 4 unit Tests. ( I am executing with 2 processes in each case using $mpiexec -np 2 ./flash3 )</div>
<div><br></div><div> I am listing those simulations and unit tests below..I need your patience here..Kindly go through them one by one and let me know how should I do the setup and </div><div> how should I set the runtime parameters for each of them so as to execute these 4 simulations and 4 unit Tests successfully.</div>
<div><br></div><div> ( If you have some sample setup options and runtime parameters that work, kindly let me know, I would be happy to execute and check those for these simulations/unitTests )</div><div><br></div><div> 1) unitTest/HelmHoltz</div>
<div><br></div><div> $ ./setup unitTest/Eos/HelmHoltz -auto -3d -ostype=Linux -makefile=pg -portable +ug +serialIO</div><div><br></div><div> Error:</div><div> ( added iProcs = 2, jProcs = 1, kProcs = 1 in flash.par file )</div>
<div> ----------------------------------</div><div> <font color="#FF0000"> Error message is [Eos] Error: too many iterations in Helmholtz Eos </font></div><div><font color="#FF0000"> Calling MPI_Abort() for shutdown in 2 seconds!</font></div>
<div> ---------------------------------</div><div><br></div><div> 2) unitTest/Gravity/Poisson2</div><div><br></div><div> $ ./setup unitTest/Gravity/poisson2 -auto +spherical -makefile=pg -ostype=Linux -portable +parallelio</div>
<div><br></div><div> Error:</div><div> ( changed geometry = "spherical" in flash.par file )</div><div> -----------------------------</div><div> <font color="#FF0000">Error message is ERROR: radial coordinate cannot be < 0.0</font></div>
<div><font color="#FF0000"> Calling MPI_Abort() for immediate shutdown!</font></div><div> -----------------------------</div><div><br></div><div> 3) unitTest/Grid/UGReordered</div><div><br></div><div> $ ./setup unitTest/Grid/UGReordered -auto -makefile=pg -ostype=Linux -portable +ug +parallelio</div>
<div><br></div><div> Error ( during $make ) :</div><div> ---------------------------</div><div> <font color="#FF0000"> PGF90-S-0084-Illegal use of symbol scratch - not public entity of module (gr_createDomain.F90: 46)</font></div>
<div><font color="#FF0000"> 0 inform, 0 warnings, 1 severes, 0 fatal for gr_createdomain</font></div><div><font color="#FF0000"> make: *** [gr_createDomain.o] Error 2 </font> </div><div> --------------------------</div>
<div><br></div><div> 4) unitTest/PFFT_PoissonFD</div><div><br></div><div> $ ./setup unitTest/PFFT_PoissonFD -auto -makefile=pg -ostype=Linux -portable +parallelio</div><div><br></div><div> Error:</div><div> -----------------------</div>
<div> <font color="#FF0000">DRIVER_ABORT: io_writeData: localNumBlocks == 0</font></div><div><font color="#FF0000"><br></font></div><div><font color="#FF0000"> job aborted:</font></div><div><font color="#FF0000"> [ranks] message</font></div>
<div><font color="#FF0000"><br></font></div><div><font color="#FF0000"> [0] terminated</font></div><div><font color="#FF0000"><br></font></div><div><font color="#FF0000"> [1] application aborted</font></div><div>
<font color="#FF0000"> aborting MPI_COMM_WORLD, error 1, comm rank 1</font></div><div> -----------------------</div><div><br></div><div> 5) SodSpherical</div><div><br></div><div> $ ./setup SodSpherical -auto -2d +spherical -makefile=pg -ostype=Linux -portable +parallelio</div>
<div><br></div><div> Error:</div><div> ---------------------</div><div> <font color="#FF0000">amr_block_geometry ERROR : blk 1 1 not found on pe</font></div><div><font color="#FF0000"> 0 strt_buffer:last_buffer 10001 10000 laddress</font></div>
<div><font color="#FF0000"><br></font></div><div><font color="#FF0000"> job aborted:</font></div><div><font color="#FF0000"> [ranks] message</font></div><div><font color="#FF0000"><br></font></div><div><font color="#FF0000"> [0] application aborted</font></div>
<div><font color="#FF0000"> aborting MPI_COMM_WORLD, error 1242328, comm rank 0</font></div><div><font color="#FF0000"><br></font></div><div><font color="#FF0000"> [1] terminated</font></div><div> --------------------</div>
<div><br></div><div> 6) SBlast</div><div> </div><div> $ ./setup SBlast -auto -makefile=pg -ostype=Linux -portable +parallelio</div><div> </div><div> Error:</div><div> --------------------</div><div> <font color="#FF0000">Logfile_create: could not create log file</font></div>
<div><font color="#FF0000"><br></font></div><div><font color="#FF0000"> Driver_abort called. See log file for details.</font></div><div><font color="#FF0000"> Error message is Logfile_create : could not create logfile</font></div>
<div><font color="#FF0000"> Calling MPI_Abort() for immediate shutdown!</font></div><div><font color="#FF0000"><br></font></div><div><font color="#FF0000"> Logfile_open: Error: cannot open log file; io_status = 2</font></div>
<div><font color="#FF0000"> Logfile_open: Error: cannot open log file; io_status = 2</font></div><div><font color="#FF0000"><br></font></div><div><font color="#FF0000"> job aborted:</font></div>
<div><font color="#FF0000"> [ranks] message</font></div><div><font color="#FF0000"><br></font></div><div><font color="#FF0000"> [0] application aborted</font></div><div><font color="#FF0000"> aborting MPI_COMM_WORLD, error 1, comm rank 0</font></div>
<div><font color="#FF0000"><br></font></div><div><font color="#FF0000"> [1] terminated</font></div><div> --------------------</div><div><br></div><div> 7) DustCollapse</div><div><br></div><div> $ ./setup DustCollapse -auto +spherical -makefile=pg -ostype=Linux -portable +parallelio</div>
<div><br></div><div> Error:</div><div> ( changed geometry = "spherical" in flash.par file )</div><div> -------------------</div><div> <font color="#FF0000">Error message is ERROR: reflecting boundary required at x = 0.0 for radial coords</font></div>
<div><font color="#FF0000"> Calling MPI_Abort() for immediate shutdown!</font></div><div> -------------------</div><div><br></div><div> 8) Orbit</div><div><br></div><div> $ ./setup Orbit -auto +spherical -makefile=pg -ostype=Linux -portable +parallelio</div>
<div><br></div><div> Error:</div><div> ( changed geometry = "spherical" in flash.par file )</div><div> -------------------</div><div> <font color="#FF0000">amr_block_geometry ERROR : blk 1 1 not found on pe</font></div>
<div><font color="#FF0000"> 0 strt_buffer:last_buffer 10001 10000 laddress</font></div><div><font color="#FF0000"><br></font></div><div><font color="#FF0000"> job aborted:</font></div><div>
<font color="#FF0000"> [ranks] message</font></div><div><font color="#FF0000"><br></font></div><div><font color="#FF0000"> [0] application aborted</font></div><div><font color="#FF0000"> aborting MPI_COMM_WORLD, error 1242332, comm rank 0</font></div>
<div><font color="#FF0000"><br></font></div><div><font color="#FF0000"> [1] terminated</font></div><div> -------------------</div><div><br></div><div> I know it is a very long email and might be asking too much..but I want to make sure everything works.</div>
<div> I would be very glad if you could help me with this.</div><div><br></div><div>Thanks & Regards,</div><div>Kunal</div>