<html><body><div style="color:#000; background-color:#fff; font-family:HelveticaNeue, Helvetica Neue, Helvetica, Arial, Lucida Grande, sans-serif;font-size:16px"><div id="yiv0348693468"><div class="qtdSeparateBR"><br><br></div><div class="yiv0348693468yqt9925611823" id="yiv0348693468yqtfd91017"><div id="yui_3_16_0_1_1417806113163_47227"><div id="yui_3_16_0_1_1417806113163_47226" style="color:#000;background-color:#fff;font-family:HelveticaNeue, Helvetica Neue, Helvetica, Arial, Lucida Grande, sans-serif;font-size:16px;"><div id="yiv2425773361yui_3_16_0_1_1417806113163_5583" style="" class=""><div id="yiv2425773361yui_3_16_0_1_1417806113163_5582" style="" class=""><div id="yiv2425773361yui_3_16_0_1_1417806113163_5581" style="" class=""><div id="yui_3_16_0_1_1417806113163_47172" style="" class=""><div id="yui_3_16_0_1_1417806113163_47173" style="" class="">Hi everyone,<br style="" class=""><br style="" class=""></div>I'm trying to run Sod test with Uniform Grid with +nofbs option in FLASH4.2.<br style="" class=""></div>So I set these values in flash.par:<br style="" class="">iGridSize = 8 #defined as nxb * iprocs<br style="" class="">jGridSize = 8<br style="" class="">kGridSize = 1<br style="" class="">iProcs = 4 #number or procs in the i direction <br style="" class="">jProcs = 2<br style="" class="">kProcs = 1 <br style="" class=""><br style="" class=""></div>Attached
you can find my makefile.h and flash.par files. I haven't changed
anything else. I was successful to build the test but when I ran it, I
got this error:<br style="" class=""><br style="" class="">nlrafsari@trapezium:~/FLASH4. 2/object$ mpirun -np 8 ./flash4<br style="" class=""> RuntimeParameters_read: ignoring unknown parameter "lrefine_max"...<br style="" class=""> RuntimeParameters_read: ignoring unknown parameter "refine_var_1"...<br style="" class=""> RuntimeParameters_read: ignoring unknown parameter "order"...<br style="" class=""> RuntimeParameters_read: ignoring unknown parameter "slopeLimiter"...<br style="" class=""> RuntimeParameters_read: ignoring unknown parameter "LimitedSlopeBeta"...<br style="" class=""> RuntimeParameters_read: ignoring unknown parameter "use_avisc"...<br style="" class=""> RuntimeParameters_read: ignoring unknown parameter "use_flattening"...<br style="" class=""> RuntimeParameters_read: ignoring unknown parameter "use_upwindTVD"...<br style="" class=""> RuntimeParameters_read: ignoring unknown parameter "RiemannSolver"...<br style="" class=""> RuntimeParameters_read: ignoring unknown parameter "entropy"...<br style="" class=""> RuntimeParameters_read: ignoring unknown parameter "shockDetect"...<br style="" class=""> MaterialProperties initialized<br style="" class=""> Cosmology initialized<br style="" class=""> Source terms initialized<br style="" class="">Assertion failed in file ch3u_buffer.c at line 77: FALSE<br style="" class="">Assertion failed in file ch3u_buffer.c at line 77: FALSE<br style="" class="">memcpy argument memory ranges overlap, dst_=0x1d656d0 src_=0x1d67c50 len_=38400<br style="" class=""><br style="" class="">internal ABORT - process 6<br style="" class="">Assertion failed in file ch3u_buffer.c at line 77: FALSE<br style="" class="">memcpy argument memory ranges overlap, dst_=0x26546d0 src_=0x2656c50 len_=38400<br style="" class=""><br style="" class="">internal ABORT - process 1<br style="" class="">Assertion failed in file ch3u_buffer.c at line 77: FALSE<br style="" class="">memcpy argument memory ranges overlap, dst_=0x21836d0 src_=0x2185c50 len_=38400<br style="" class=""><br style="" class="">internal ABORT - process 5<br style="" class="">memcpy argument memory ranges overlap, dst_=0xf3e6d0 src_=0xf40c50 len_=38400<br style="" class=""><br style="" class="">internal ABORT - process 2<br style="" class=""><br style="" class=""></div>I would be very thankful if anyone can help me with this error. <br style="" class=""><br style="" class=""></div>Nilou <div id="yui_3_16_0_1_1417806113163_47225" class="yiv0348693468qtdSeparateBR"><br clear="none"><br clear="none"></div><div class="yiv0348693468yahoo_quoted" id="yiv0348693468yui_3_16_0_1_1417806113163_40033" style="display: block;"><div id="yiv0348693468yui_3_16_0_1_1417806113163_40032" style="font-family:HelveticaNeue, Helvetica Neue, Helvetica, Arial, Lucida Grande, sans-serif;font-size:16px;"><div id="yiv0348693468yui_3_16_0_1_1417806113163_40031" style="font-family:HelveticaNeue, Helvetica Neue, Helvetica, Arial, Lucida Grande, sans-serif;font-size:16px;"><div class="yiv0348693468y_msg_container" id="yiv0348693468yui_3_16_0_1_1417806113163_40030"><div id="yiv0348693468"><div id="yiv0348693468yui_3_16_0_1_1417806113163_40029"><div id="yiv0348693468yui_3_16_0_1_1417806113163_40028" style="color:#000;background-color:#fff;font-family:HelveticaNeue, Helvetica Neue, Helvetica, Arial, Lucida Grande, sans-serif;font-size:16px;"><div class="yiv0348693468" id="yiv0348693468yui_3_16_0_1_1417806113163_5583" style=""><div class="yiv0348693468" id="yiv0348693468yui_3_16_0_1_1417806113163_5582" style=""><div class="yiv0348693468" id="yiv0348693468yui_3_16_0_1_1417806113163_5581" style=""><div class="yiv0348693468" id="yiv0348693468yui_3_16_0_1_1417806113163_40091" style=""><div class="yiv0348693468" id="yiv0348693468yui_3_16_0_1_1417806113163_40090" style="">Hi everyone,<br class="yiv0348693468" style="" clear="none"><br class="yiv0348693468" style="" clear="none"></div>I'm trying to run Sod test with Uniform Grid with +nofbs option in FLASH4.2.<br class="yiv0348693468" style="" clear="none"></div>So I set these values in flash.par:<br class="yiv0348693468" style="" clear="none">iGridSize = 8 #defined as nxb * iprocs<br class="yiv0348693468" style="" clear="none">jGridSize = 8<br class="yiv0348693468" style="" clear="none">kGridSize = 1<br class="yiv0348693468" style="" clear="none">iProcs = 4 #number or procs in the i direction <br class="yiv0348693468" style="" clear="none">jProcs = 2<br class="yiv0348693468" style="" clear="none">kProcs = 1 <br class="yiv0348693468" style="" clear="none"><br class="yiv0348693468" style="" clear="none"></div>Attached
you can find my makefile.h and flash.par files. I haven't changed
anything else. I was successful to build the test but when I ran it, I
got this error:<br class="yiv0348693468" style="" clear="none"><br class="yiv0348693468" style="" clear="none">nlrafsari@trapezium:~/FLASH4. 2/object$ mpirun -np 8 ./flash4<br class="yiv0348693468" style="" clear="none"> RuntimeParameters_read: ignoring unknown parameter "lrefine_max"...<br class="yiv0348693468" style="" clear="none"> RuntimeParameters_read: ignoring unknown parameter "refine_var_1"...<br class="yiv0348693468" style="" clear="none"> RuntimeParameters_read: ignoring unknown parameter "order"...<br class="yiv0348693468" style="" clear="none"> RuntimeParameters_read: ignoring unknown parameter "slopeLimiter"...<br class="yiv0348693468" style="" clear="none"> RuntimeParameters_read: ignoring unknown parameter "LimitedSlopeBeta"...<br class="yiv0348693468" style="" clear="none"> RuntimeParameters_read: ignoring unknown parameter "use_avisc"...<br class="yiv0348693468" style="" clear="none"> RuntimeParameters_read: ignoring unknown parameter "use_flattening"...<br class="yiv0348693468" style="" clear="none"> RuntimeParameters_read: ignoring unknown parameter "use_upwindTVD"...<br class="yiv0348693468" style="" clear="none"> RuntimeParameters_read: ignoring unknown parameter "RiemannSolver"...<br class="yiv0348693468" style="" clear="none"> RuntimeParameters_read: ignoring unknown parameter "entropy"...<br class="yiv0348693468" style="" clear="none"> RuntimeParameters_read: ignoring unknown parameter "shockDetect"...<br class="yiv0348693468" style="" clear="none"> MaterialProperties initialized<br class="yiv0348693468" style="" clear="none"> Cosmology initialized<br class="yiv0348693468" style="" clear="none"> Source terms initialized<br class="yiv0348693468" style="" clear="none">Assertion failed in file ch3u_buffer.c at line 77: FALSE<br class="yiv0348693468" style="" clear="none">Assertion failed in file ch3u_buffer.c at line 77: FALSE<br class="yiv0348693468" style="" clear="none">memcpy argument memory ranges overlap, dst_=0x1d656d0 src_=0x1d67c50 len_=38400<br class="yiv0348693468" style="" clear="none"><br class="yiv0348693468" style="" clear="none">internal ABORT - process 6<br class="yiv0348693468" style="" clear="none">Assertion failed in file ch3u_buffer.c at line 77: FALSE<br class="yiv0348693468" style="" clear="none">memcpy argument memory ranges overlap, dst_=0x26546d0 src_=0x2656c50 len_=38400<br class="yiv0348693468" style="" clear="none"><br class="yiv0348693468" style="" clear="none">internal ABORT - process 1<br class="yiv0348693468" style="" clear="none">Assertion failed in file ch3u_buffer.c at line 77: FALSE<br class="yiv0348693468" style="" clear="none">memcpy argument memory ranges overlap, dst_=0x21836d0 src_=0x2185c50 len_=38400<br class="yiv0348693468" style="" clear="none"><br class="yiv0348693468" style="" clear="none">internal ABORT - process 5<br class="yiv0348693468" style="" clear="none">memcpy argument memory ranges overlap, dst_=0xf3e6d0 src_=0xf40c50 len_=38400<br class="yiv0348693468" style="" clear="none"><br class="yiv0348693468" style="" clear="none">internal ABORT - process 2<br class="yiv0348693468" style="" clear="none"><br class="yiv0348693468" style="" clear="none"></div>I would be very thankful if anyone can help me with this error. <br class="yiv0348693468" style="" clear="none"><br class="yiv0348693468" style="" clear="none"></div>Nilou <div class="yiv0348693468" dir="ltr" id="yiv0348693468yui_3_16_0_1_1417806113163_5491" style=""><br class="yiv0348693468" style="" clear="none"></div></div></div></div><br clear="none"><br clear="none"></div> </div> </div> </div> </div><div class="" id="yui_3_16_0_1_1417806113163_47226" style="color:#000;background-color:#fff;font-family:HelveticaNeue, Helvetica Neue, Helvetica, Arial, Lucida Grande, sans-serif;font-size:16px;"> </div></div></div></div></div></body></html>