<div dir="ltr">Thank you Jason I try your suggestion, thanks in advance<br></div><div class="gmail_extra"><br><div class="gmail_quote">On Thu, Mar 3, 2016 at 11:56 AM, Jason Galyardt <span dir="ltr"><<a href="mailto:jason.galyardt@gmail.com" target="_blank">jason.galyardt@gmail.com</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr"><div><div><div><div>Hi Ludmila,<br><br></div>Have you tried using one of the pre-built binary versions of VisIt? FLASH support should be available in all of these, and watching how a pre-built binary fails may give you a clue as to any missing libraries in your environment.<br><br></div>Good luck!<br><br></div><div>Jason<br><br>----<br></div>Jason Galyardt<br></div><div>Department of Physics and Astronomy<br></div>University of Georgia<br><br></div><div class="HOEnZb"><div class="h5"><div class="gmail_extra"><br><div class="gmail_quote">On Thu, Mar 3, 2016 at 9:49 AM, Scott Feister <span dir="ltr"><<a href="mailto:sfeister@gmail.com" target="_blank">sfeister@gmail.com</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr"><div>Alright, I reproduced your error (but didn't fix it). I normally run VisIt from my laptop, but I realized that when I installed to our local cluster, I see the same problem you have; it is not in the list. it did not install with FLASH support, apparently, because of not finding HDF5 libraries. This is seen in the log which was output into the same folder as your build script (in my case, it was called ""build_visit2_10_0_log"<br><br>...<br>-- Checking database plugin dependencies.<br>...<br>-- Checking FLASH plugin dependencies: HDF5<br>-- NOT FOUND: HDF5<br><br></div><div>Do you have that in your log, too? Let me know if you making sure you've pre-installed HDF5 libraries solves the issue.<br><br></div><div>Scott<br></div><div class="gmail_extra"><br clear="all"><div><div><div dir="ltr"><div><div dir="ltr"><br>Scott Feister<br>Ph.D. Candidate, Physics<br>The Ohio State University<br>Research Scientist<br>Air Force Research Laboratory</div></div></div></div></div>
<br><div class="gmail_quote">On Thu, Mar 3, 2016 at 9:40 AM, Ludmila María Rechiman <span dir="ltr"><<a href="mailto:ludmilarechiman@gmail.com" target="_blank">ludmilarechiman@gmail.com</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr">Thank you Tomek for your help, I am doing what you suggest but the FLASH is not on the list, do you know how to added? thank you very much for your time<br></div><div class="gmail_extra"><div><div><br><div class="gmail_quote">On Thu, Mar 3, 2016 at 11:34 AM, Tomasz Plewa <span dir="ltr"><<a href="mailto:tplewa@fsu.edu" target="_blank">tplewa@fsu.edu</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
<div text="#000000" bgcolor="#FFFFFF">
<tt>Dear Ludmila -<br>
<br>
From the top top of command window, select <br>
<br>
Options -> Plugin Manager -> Databases -> FLASH -> Add
to preferred list -> Apply<br>
<br>
You may want to move FLASH to the top of the list and select Apply
again.<br>
<br>
Then select<br>
<br>
Options -> Save Settings<br>
<br>
You may need to restart Visit for the above changes to take place.<br>
<br>
Hope this helps.<br>
<br>
Tomek<br>
--</tt><div><div><br>
<div>On 03/03/16 08:13, Ludmila María
Rechiman wrote:<br>
</div>
<blockquote type="cite">
<div dir="ltr">
<div>
<div>
<div>Dear Scott and Jonathan,<br>
</div>
thank you for
the answer, yes, I have tried what you suggest, the thing is
that in the popup menu (filetype list) when I tried to open
a FLASH file, it does not show the option FLASH. <br>
</div>
I do not understand, I followed the standard procedure but
FLASH option is not on the list.<br>
<br>
</div>
thank you in advance<br>
</div>
<div class="gmail_extra"><br>
<div class="gmail_quote">On Wed, Mar 2, 2016 at 6:24 PM, Slavin,
Jonathan <span dir="ltr"><<a href="mailto:jslavin@cfa.harvard.edu" target="_blank">jslavin@cfa.harvard.edu</a>></span>
wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
<div dir="ltr">
<div class="gmail_extra">
<div class="gmail_default" style="font-family:arial,helvetica,sans-serif">Hi
Ludmila,</div>
<div class="gmail_default" style="font-family:arial,helvetica,sans-serif"><br>
</div>
<div class="gmail_default" style="font-family:arial,helvetica,sans-serif">I have
found that if I just start visit without any
parameters and then open my FLASH generated plot or
checkpoint file without specifying the file type, I
get errors. However, if I select the file I want to
open and then choose FLASH from the filetype list
(open file as type), it works. Have you tried that?</div>
<div class="gmail_default" style="font-family:arial,helvetica,sans-serif"><br>
</div>
<div class="gmail_default" style="font-family:arial,helvetica,sans-serif">Regards,</div>
<div class="gmail_default" style="font-family:arial,helvetica,sans-serif">Jon</div>
<br>
<div class="gmail_quote">On Wed, Mar 2, 2016 at 4:02 PM,
<span dir="ltr"><<a href="mailto:flash-users-request@flash.uchicago.edu" target="_blank">flash-users-request@flash.uchicago.edu</a>></span>
wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
<div style="overflow:hidden">From: "Ludmila María
Rechiman" <<a href="mailto:ludmilarechiman@gmail.com" target="_blank">ludmilarechiman@gmail.com</a>><br>
To: <a href="mailto:flash-users@flash.uchicago.edu" target="_blank">flash-users@flash.uchicago.edu</a><br>
Cc: <br>
Date: Wed, 2 Mar 2016 18:02:14 -0300<br>
Subject: [FLASH-USERS] ask for some help<span><br>
<div dir="ltr">
<div>
<div>Dear community of flash users,<br>
</div>
i am new using FLASH. I have install all the
requirements and I was able to run
succesfully the Sedov problem and the
WindTunnel problem in serial and in parallel
and varying some parameters. The thing is
that I also install visit 2.10, and it seems
to work but the plugin dedicated to read the
FLASH data it was not installed, then I can
not visualize any data.<br>
<br>
</div>
<div>I have made the following steps:<br>
</div>
<div><br>
</div>
1) I have run the script build_visit.sh that I
download from (<a href="http://portal.nersc.gov/project/visit/releases/2.10.0/build_visit2_10_0" target="_blank">http://portal.nersc.gov/project/visit/releases/2.10.0/build_visit2_10_0</a>).
<br>
<br clear="all">
<div>
<div>
<div>2)In the folder
/home/ludmila/visit/visit2.10.0/src I
have run : make all . I attach the log
file<br>
<br>
</div>
<div>3) then in the folder I run :
/home/ludmila/visit/visit2.10.0/src/bin/./visit
-assume_format FLASH <br>
<br>
</div>
<div>4)The visit Gui interface open but
when I open the results of my simulation
I get the following error (I attach the
.png of the screen):<br>
<br>
<p style="margin:0px;text-indent:0px">VisIt
could not read from the file
"/home/ludmila/FLASH4.3/object/sedov_hdf5_chk_*
database".</p>
<p style="margin:0px;text-indent:0px"><br>
</p>
<p style="margin:0px;text-indent:0px">The
generated error message was:</p>
<p style="margin:0px;text-indent:0px"><br>
</p>
<p style="margin:0px;text-indent:0px">There
was an error opening
/home/ludmila/FLASH4.3/object/sedov_hdf5_chk_*
database. It may be an invalid file.</p>
<p style="margin:0px;text-indent:0px">VisIt
tried using the following file format
readers to open the file: <No
suitable plugins were identified></p>
<p style="margin:0px;text-indent:0px"><br>
</p>
<p style="margin:0px;text-indent:0px">5)
I thoght that if I run:
/home/ludmila/visit/visit2.10.0/src/databases/cmake
.</p>
<p style="margin:0px;text-indent:0px"><br>
</p>
<p style="margin:0px;text-indent:0px">it
will compile all the plugins including
the FLASH, but I get the following
error:</p>
<p style="margin:0px;text-indent:0px"><br>
</p>
<p style="margin:0px;text-indent:0px">see
the last .png<br>
</p>
<br>
</div>
<div>I have been trying several ideas but
no one seem to work. I would like to ask
you if some have some idea of what am I
doing wrong of if I am missing some
thing.<br>
<br>
</div>
<div>Thank you for your time <br>
<br>
<br>
</div>
<div><br>
</div>
<div>-- <br>
<div>ludmila<br>
</div>
</div>
</div>
</div>
</div>
</span></div>
</blockquote>
</div>
<span><font color="#888888"><br>
<br>
<br clear="all">
<div><br>
</div>
-- <br>
<div>
<div dir="ltr">
<div>
<div dir="ltr">________________________________________________________<br>
Jonathan D. Slavin
Harvard-Smithsonian CfA<br>
<a href="mailto:jslavin@cfa.harvard.edu" target="_blank">jslavin@cfa.harvard.edu</a>
60 Garden Street, MS 83<br>
phone: <a href="tel:%28617%29%20496-7981" value="+16174967981" target="_blank">(617) 496-7981</a> Cambridge, MA
02138-1516<br>
cell: <a href="tel:%28781%29%20363-0035" value="+17813630035" target="_blank">(781) 363-0035</a> USA<br>
________________________________________________________<br>
<br>
</div>
</div>
</div>
</div>
</font></span></div>
</div>
</blockquote>
</div>
<br>
<br clear="all"><span><font color="#888888">
<br>
-- <br>
<div>ludmila<br>
</div>
</font></span></div><span><font color="#888888">
</font></span></blockquote><span><font color="#888888">
<br>
</font></span></div></div></div><span><font color="#888888">
</font></span></blockquote></div><span><font color="#888888"><br><br clear="all"><br></font></span></div></div><span><font color="#888888"><span><font color="#888888">-- <br><div>ludmila<br></div>
</font></span></font></span></div>
</blockquote></div><br></div></div>
</blockquote></div><br></div>
</div></div></blockquote></div><br><br clear="all"><br>-- <br><div class="gmail_signature">ludmila<br></div>
</div>