<html><head><meta http-equiv="Content-Type" content="text/html charset=us-ascii"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;" class=""><div class=""><br class=""></div><br class=""><div class="">
<div style="color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px;">Hi,</div><div style="color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px;"><br class=""></div><div style="color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px;">It turns out this was a Python setup issue. That is, setup.py and setup_depends.py are not compatible with python3 that is used on my system by default. </div><div style="color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px;"><br class=""></div><div style="color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px;">Consequently, Makefile.Depend did not get automatically generated in the object directory and dependencies were wrong.</div><div style="color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px;"><br class=""></div><div style="color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px;">Switching to python2, redoing the setup, and compiling fixed the problem.</div><div style="color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px;"><br class=""></div><div style="color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px;">Cheers,</div><div style="color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px;">Mateusz</div><div style="color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px;"><br class=""></div><div style="color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px;"><br class=""></div>
</div>
<br class=""><div><blockquote type="cite" class=""><div class="">On Dec 14, 2019, at 8:43 AM, Eddie Hansen <<a href="mailto:ehansen@flash.uchicago.edu" class="">ehansen@flash.uchicago.edu</a>> wrote:</div><br class="Apple-interchange-newline"><div class=""><div dir="auto" class="">This looks like a setup issue. Probably a unit missing from the Config file. Can you send the output when you run setup and send your Config file from the Sedov directory? </div><br class=""><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Fri, Dec 13, 2019, 9:46 PM Mateusz Ruszkowski <<a href="mailto:mateuszr@umich.edu" class="">mateuszr@umich.edu</a>> wrote:<br class=""></div><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div style="word-wrap:break-word;line-break:after-white-space" class=""><div class=""><br class=""></div><div class=""><br class=""></div><div class="">Hi,</div><div class=""><br class=""></div><div class="">I am trying to compile straight out-of-the-box version of the Sedov problem (FLASH version 4.2.2). I set up the problem via:</div><div class=""> </div><div class=""><div style="margin:0px;font-stretch:normal;font-size:10px;line-height:normal;font-family:Monaco;color:rgb(242,242,242);background-color:rgba(0,0,0,0.85098)" class=""><span style="font-variant-ligatures:no-common-ligatures" class="">./setup Sedov -3d -auto</span></div></div><div class=""><br class=""></div><div class="">and then attempted to compile but got the following error:</div><div class=""><br class=""></div><div class=""><div style="margin:0px;font-stretch:normal;font-size:10px;line-height:normal;font-family:Monaco;color:rgb(242,242,242);background-color:rgba(0,0,0,0.85098)" class=""><span style="font-variant-ligatures:no-common-ligatures" class="">mpif90 -fpic -i_dynamic -mcmodel=medium -c -r8 -i4 -O3 -real_size 64 -fp-model precise -DMAXBLOCKS=200 -DNXB=8 -DNYB=8 -DNZB=8 -DN_DIM=3 Conductivity.F90</span></div><div style="margin:0px;font-stretch:normal;font-size:10px;line-height:normal;font-family:Monaco;color:rgb(242,242,242);background-color:rgba(0,0,0,0.85098)" class=""><span style="font-variant-ligatures:no-common-ligatures" class="">ifort: command line remark #10148: option '-i_dynamic' not supported</span></div><div style="margin:0px;font-stretch:normal;font-size:10px;line-height:normal;font-family:Monaco;color:rgb(242,242,242);background-color:rgba(0,0,0,0.85098)" class=""><span style="font-variant-ligatures:no-common-ligatures" class="">Conductivity.F90(60): error #7002: Error in opening the compiled module file. Check INCLUDE paths. [CONDUCTIVITY_INTERFACE]</span></div><div style="margin:0px;font-stretch:normal;font-size:10px;line-height:normal;font-family:Monaco;color:rgb(242,242,242);background-color:rgba(0,0,0,0.85098)" class=""><span style="font-variant-ligatures:no-common-ligatures" class=""> use Conductivity_interface, ONLY: Conductivity</span></div><div style="margin:0px;font-stretch:normal;font-size:10px;line-height:normal;font-family:Monaco;color:rgb(242,242,242);background-color:rgba(0,0,0,0.85098)" class=""><span style="font-variant-ligatures:no-common-ligatures" class="">------^</span></div><div style="margin:0px;font-stretch:normal;font-size:10px;line-height:normal;font-family:Monaco;color:rgb(242,242,242);background-color:rgba(0,0,0,0.85098)" class=""><span style="font-variant-ligatures:no-common-ligatures" class="">Conductivity.F90(81): error #6406: Conflicting attributes or multiple declaration of name. [CONDUCTIVITY]</span></div><div style="margin:0px;font-stretch:normal;font-size:10px;line-height:normal;font-family:Monaco;color:rgb(242,242,242);background-color:rgba(0,0,0,0.85098)" class=""><span style="font-variant-ligatures:no-common-ligatures" class=""> call Conductivity(solnVec(7),solnVec(1), &</span></div><div style="margin:0px;font-stretch:normal;font-size:10px;line-height:normal;font-family:Monaco;color:rgb(242,242,242);background-color:rgba(0,0,0,0.85098)" class=""><span style="font-variant-ligatures:no-common-ligatures" class="">-------^</span></div><div style="margin:0px;font-stretch:normal;font-size:10px;line-height:normal;font-family:Monaco;color:rgb(242,242,242);background-color:rgba(0,0,0,0.85098)" class=""><span style="font-variant-ligatures:no-common-ligatures" class="">Conductivity.F90(60): error #6580: Name in only-list does not exist or is not accessible. [CONDUCTIVITY]</span></div><div style="margin:0px;font-stretch:normal;font-size:10px;line-height:normal;font-family:Monaco;color:rgb(242,242,242);background-color:rgba(0,0,0,0.85098)" class=""><span style="font-variant-ligatures:no-common-ligatures" class=""> use Conductivity_interface, ONLY: Conductivity</span></div><div style="margin:0px;font-stretch:normal;font-size:10px;line-height:normal;font-family:Monaco;color:rgb(242,242,242);background-color:rgba(0,0,0,0.85098)" class=""><span style="font-variant-ligatures:no-common-ligatures" class="">------------------------------------^</span></div><div style="margin:0px;font-stretch:normal;font-size:10px;line-height:normal;font-family:Monaco;color:rgb(242,242,242);background-color:rgba(0,0,0,0.85098)" class=""><span style="font-variant-ligatures:no-common-ligatures" class="">compilation aborted for Conductivity.F90 (code 1)</span></div><div style="margin:0px;font-stretch:normal;font-size:10px;line-height:normal;font-family:Monaco;color:rgb(242,242,242);background-color:rgba(0,0,0,0.85098)" class=""><span style="font-variant-ligatures:no-common-ligatures" class="">Makefile:115: recipe for target 'Conductivity.o' failed</span></div><div style="margin:0px;font-stretch:normal;font-size:10px;line-height:normal;font-family:Monaco;color:rgb(242,242,242);background-color:rgba(0,0,0,0.85098)" class=""><span style="font-variant-ligatures:no-common-ligatures" class="">gmake: *** [Conductivity.o] Error 1</span></div></div><div class=""><span style="font-variant-ligatures:no-common-ligatures" class=""><br class=""></span></div><div class=""><span style="font-variant-ligatures:no-common-ligatures" class="">Any idea why this is happening?</span></div><div class=""><span style="font-variant-ligatures:no-common-ligatures" class=""><br class=""></span></div><div class=""><span style="font-variant-ligatures:no-common-ligatures" class="">Thanks,</span></div><div class=""><span style="font-variant-ligatures:no-common-ligatures" class="">Mateusz</span></div><div class=""><span style="font-variant-ligatures:no-common-ligatures" class=""><br class=""></span></div><div class=""><span style="font-variant-ligatures:no-common-ligatures" class=""><br class=""></span></div></div></blockquote></div>
</div></blockquote></div><br class=""></body></html>