<div dir="ltr"><div class="gmail_default" style="font-family:monospace,monospace;font-size:small">Dear Himakar,</div><div class="gmail_default" style="font-family:monospace,monospace;font-size:small"><br></div><div class="gmail_default" style="font-family:monospace,monospace;font-size:small">You may find the discussion in this thread useful:</div><div class="gmail_default" style="font-family:monospace,monospace;font-size:small"><br></div><div class="gmail_default" style="font-family:monospace,monospace;font-size:small"><a href="http://flash.uchicago.edu/pipermail/flash-users/2019-July/002968.html">http://flash.uchicago.edu/pipermail/flash-users/2019-July/002968.html</a></div><div class="gmail_default" style="font-family:monospace,monospace;font-size:small"><br></div><div class="gmail_default" style="font-family:monospace,monospace;font-size:small">Cheers<br></div><div><div dir="ltr" class="gmail_signature" data-smartmail="gmail_signature"><div dir="ltr"><div><div dir="ltr"><div><div dir="ltr"><div><div><div><font size="2"><span style="font-family:monospace,monospace">Naveen Yadav<br></span></font></div><font size="2"><span style="font-family:monospace,monospace">Post-doctoral Researcher,<br></span></font></div><font size="2"><span style="font-family:monospace,monospace">Max Planck Institute For Astrophysics,<br></span></font></div><font size="2"><span style="font-family:monospace,monospace">Garching, Germany.</span></font><br></div></div><div dir="ltr"><font size="2"><span style="font-family:monospace,monospace"><br></span></font></div><div dir="ltr"><font face="monospace">"The purpose of (scientific) computing is insight, not numbers" -- Richard Hamming.</font><font size="2"><span style="font-family:monospace,monospace"><br></span></font></div></div></div></div></div></div><br></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Wed, Apr 28, 2021 at 11:10 PM Ganti, Himakar (gantihr) <<a href="mailto:gantihr@mail.uc.edu">gantihr@mail.uc.edu</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex">




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I am unable to run any simulation with IO. I am using the Docker container  <b style="font-style:italic">icksa/flash4-deps
</b>with FLASH 4.6.2, with HDF5 1.8.11</div>
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Configure option runs fine<span style="font-family:Calibri,Arial,Helvetica,sans-serif;font-size:12pt;color:rgb(0,0,0)"><br>
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<b><i>$ ./setup Sedov --auto +noio</i></b></div>
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<span style="margin:0px;font-size:12pt">When running the 'make' command, the following is encountered:<br>
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<b><i>$ make -j XX</i></b></div>
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returns the following after it starts compiling the objects:</div>
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-L /usr/local/include/lib -lhdf5 -lz  
<div>/usr/local/lib/libhdf5.a(H5PL.o): In function `H5PL_term_interface':</div>
<div>H5PL.c:(.text+0xa7): undefined reference to `dlclose'</div>
<div>/usr/local/lib/libhdf5.a(H5PL.o): In function `H5PL_load':</div>
<div>H5PL.c:(.text+0x319): undefined reference to `dlsym'</div>
<div>H5PL.c:(.text+0x45c): undefined reference to `dlopen'</div>
<div>H5PL.c:(.text+0x475): undefined reference to `dlsym'</div>
<div>H5PL.c:(.text+0x5a4): undefined reference to `dlclose'</div>
<div>H5PL.c:(.text+0x629): undefined reference to `dlerror'</div>
<div>H5PL.c:(.text+0x83c): undefined reference to `dlclose'</div>
<div>collect2: error: ld returned 1 exit status</div>
<div>make: *** [flash4] Error 1</div>
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The simulation runs with +noio option, but no simulation (flow-domain files for visit) or plot files are generated in the
<b><i>object </i></b>folder. Can anyone please help me with this?</div>
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<span style="margin:0px;font-size:12px;font-family:Times;text-align:start;background-color:rgb(255,255,255);display:inline">Sincerely,</span><br style="text-align:start;font-family:Times;font-size:12px;background-color:rgb(255,255,255)">
<span style="margin:0px;font-size:12px;font-family:Times;text-align:start;background-color:rgb(255,255,255);display:inline">Himakar Ganti</span><br style="text-align:start;font-family:Times;font-size:12px;background-color:rgb(255,255,255)">
<span style="margin:0px;font-size:12px;font-family:Times;text-align:start;background-color:rgb(255,255,255);display:inline">Doctoral Candidate |</span><span style="margin:0px;font-size:12px;font-family:Times;text-align:start;background-color:rgb(255,255,255);display:inline"> Multiphase
 Flow and Combustion Lab | Aerospace Engineering & Engineering Mechanics</span><br>
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