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<p class="MsoNormal" style="word-break:break-hangul"><span lang="EN-US" style="font-size:10.0pt;font-family:"맑은 고딕";color:#1F497D">Hi, Yên Bình<o:p></o:p></span></p>
<p class="MsoNormal" style="word-break:break-hangul"><span lang="EN-US" style="font-size:10.0pt;font-family:"맑은 고딕";color:#1F497D"><o:p> </o:p></span></p>
<p class="MsoNormal" style="word-break:break-hangul"><span lang="EN-US" style="font-size:10.0pt;font-family:"맑은 고딕";color:#1F497D">Your error message usually occur when your execution file cannot find object file.<br>
so you should export library path or insert bashrc file.<br>
<br>
input below command in prompt<br>
export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:/usr/local/hdf5/lib<o:p></o:p></span></p>
<p class="MsoNormal" style="word-break:break-hangul"><span lang="EN-US" style="font-size:10.0pt;font-family:"맑은 고딕";color:#1F497D"><o:p> </o:p></span></p>
<p class="MsoNormal" style="word-break:break-hangul"><span lang="EN-US" style="font-size:10.0pt;font-family:"맑은 고딕";color:#1F497D">Or insert that command in the bashrc file.<br>
Sincerely,<br>
Hyung Seon Song.<o:p></o:p></span></p>
<p class="MsoNormal"><b><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif">From:</span></b><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif"> flash-users <flash-users-bounces@flash.rochester.edu>
<b>On Behalf Of </b>Yen Binh<br>
<b>Sent:</b> Thursday, May 18, 2023 2:36 PM<br>
<b>To:</b> flash-users@flash.rochester.edu<br>
<b>Subject:</b> [FLASH-USERS] Error with HDF5<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US"><o:p> </o:p></span></p>
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<p class="MsoNormal"><span lang="EN-US">Dear FLASH users/developers,<br>
<br>
When I try to run the command <i>$ mpirun -np 4 flash4.</i><o:p></o:p></span></p>
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<p class="MsoNormal"><span lang="EN-US">I got an error message:<o:p></o:p></span></p>
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<p class="MsoNormal"><span lang="EN-US"><o:p> </o:p></span></p>
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<p class="MsoNormal"><i><span lang="EN-US">flash4: error while loading shared libraries: libhdf5.so.10: cannot open shared object file: No such file or directory<br>
flash4: error while loading shared libraries: libhdf5.so.10: cannot open shared object file: No such file or directory<br>
flash4: error while loading shared libraries: libhdf5.so.10: cannot open shared object file: No such file or directory<br>
--------------------------------------------------------------------------<br>
Primary job  terminated normally, but 1 process returned<br>
a non-zero exit code. Per user-direction, the job has been aborted.<br>
--------------------------------------------------------------------------<br>
flash4: error while loading shared libraries: libhdf5.so.10: cannot open shared object file: No such file or directory</span></i><span lang="EN-US"><o:p></o:p></span></p>
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<p class="MsoNormal"><span lang="EN-US"><o:p> </o:p></span></p>
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<p class="MsoNormal"><span lang="EN-US">I checked and found that the <i>libhdf5.so.10</i> file is already in the directory <i>/usr/local/hdf5/lib/.</i><o:p></o:p></span></p>
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<p style="margin:.75pt"><span lang="EN-US"><o:p> </o:p></span></p>
<p style="margin:.75pt"><span lang="EN-US">Please help me with this. Thank you very much.<o:p></o:p></span></p>
<p style="margin:.75pt"><span lang="EN-US"><o:p> </o:p></span></p>
<p style="margin:.75pt"><span lang="EN-US">Binh.<o:p></o:p></span></p>
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<p style="margin:.75pt"><span lang="EN-US"><img width="74" height="74" style="width:.7708in;height:.7708in" id="_x0000_i1025" src="https://signaturehound.com/api/v1/file/1ii3ffol0zb93j1"><o:p></o:p></span></p>
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<p style="margin:.75pt;line-height:12.75pt"><b><span lang="EN-US" style="font-size:10.0pt;font-family:"Verdana",sans-serif;color:black">Nguyen Thi Yen Binh<o:p></o:p></span></b></p>
<p style="margin:.75pt;line-height:12.75pt"><span lang="EN-US" style="font-size:10.0pt;font-family:"Verdana",sans-serif;color:#888888">College Student<o:p></o:p></span></p>
<p style="margin:.75pt;line-height:12.75pt"><span lang="EN-US" style="font-size:10.0pt;font-family:"Verdana",sans-serif;color:#888888">Space Science and Satellite Technology<o:p></o:p></span></p>
<p style="margin:.75pt;line-height:12.75pt"><span lang="EN-US" style="font-size:10.0pt;font-family:"Verdana",sans-serif;color:#888888">University of Science and Technology of Ha Noi<o:p></o:p></span></p>
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<p style="margin:.75pt;line-height:12.75pt"><span lang="EN-US"><a href="mailto:binhnty.bi12-060@st.usth.edu.vn" target="_blank"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif;color:#888888">binhnty.bi12-060@st.usth.edu.vn</span></a><o:p></o:p></span></p>
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<p style="margin:.75pt;line-height:12.75pt"><span lang="EN-US"><a href="tel:+84367533986" target="_blank"><span style="font-size:10.0pt;font-family:"Verdana",sans-serif;color:#888888">+84367533986</span></a><o:p></o:p></span></p>
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<p style="margin:.75pt"><span lang="EN-US"><img border="0" width="18" height="18" style="width:.1875in;height:.1875in" id="_x0000_i1028" src="https://signaturehound.com/api/v1/png/map/default/fa0000.png"><o:p></o:p></span></p>
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<p style="margin:.75pt;line-height:12.75pt"><span lang="EN-US" style="font-size:10.0pt;font-family:"Verdana",sans-serif;color:#888888">Tuy Hoa, Phu Yen, Viet Nam</span><span lang="EN-US"><o:p></o:p></span></p>
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<p style="margin:.75pt;mso-line-height-alt:0pt"><span lang="EN-US" style="font-size:1.0pt"><a href="https://streaklinks.com/BgqKPuuGhjJJSqDtEQHC4ck4/https%3A%2F%2Fwww.facebook.com%2Fwbinhw" target="_blank"><span style="text-decoration:none"><img border="0" width="30" height="30" style="width:.3125in;height:.3125in" id="_x0000_i1029" src="https://signaturehound.com/api/v1/png/facebook/default/1d62b0.png"></span></a><o:p></o:p></span></p>
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<p style="margin:.75pt;mso-line-height-alt:0pt"><span lang="EN-US" style="font-size:1.0pt"><a href="https://streaklinks.com/BgqKPuuREZuOeEMCjwxji2PN/https%3A%2F%2Fwww.instagram.com%2Fyenbinne%2F" target="_blank"><span style="text-decoration:none"><img border="0" width="30" height="30" style="width:.3125in;height:.3125in" id="_x0000_i1030" src="https://signaturehound.com/api/v1/png/instagram/default/1d62b0.png"></span></a><o:p></o:p></span></p>
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<p style="margin:.75pt;mso-line-height-alt:0pt"><span lang="EN-US" style="font-size:1.0pt"><a href="https://streaklinks.com/BgqKPuybm39ZVvqI1wXxhG1k/https%3A%2F%2Fgithub.com%2Fpea9" target="_blank"><span style="text-decoration:none"><img border="0" width="30" height="30" style="width:.3125in;height:.3125in" id="_x0000_i1031" src="https://signaturehound.com/api/v1/png/github/default/1d62b0.png"></span></a><o:p></o:p></span></p>
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<p class="MsoNormal"><span lang="EN-US"><img border="0" id="_x0000_i1032" src="https://mailfoogae.appspot.com/t?sender=aeWVuYmluaHB5MzA4QGdtYWlsLmNvbQ%3D%3D&type=zerocontent&guid=faf29507-07d2-4d14-a8c6-9148c3ff9a6d"></span><span lang="EN-US" style="font-size:7.5pt;font-family:"Gadugi",sans-serif;color:white">ᐧ</span><span lang="EN-US"><o:p></o:p></span></p>
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