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How many procs are you using? It might be better to just look at a chk file to see if the refinement is giving you the desired result.
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<div dir="auto" style="">******************************************</div>
<div dir="auto" style="">Eddie Hansen | Research Scientist</div>
<div dir="auto" style="">Flash Center for Computational Science</div>
<div dir="auto" style="">Dept. of Physics and Astronomy</div>
<div dir="auto" style="">University of Rochester, Rochester, NY</div>
<div dir="auto" style="">Cell 607-341-6126 | flash.rochester.edu</div>
<div dir="auto" style="">(he / him / his)</div>
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<div id="divRplyFwdMsg" dir="ltr"><font face="Calibri, sans-serif" style="font-size:11pt" color="#000000"><b>From:</b> flash-users <flash-users-bounces@flash.rochester.edu> on behalf of Lewis,Sean <scl63@drexel.edu><br>
<b>Sent:</b> Friday, September 8, 2023 4:35:48 PM<br>
<b>To:</b> flash-users@flash.rochester.edu <flash-users@flash.rochester.edu><br>
<b>Subject:</b> [FLASH-USERS] gr_markInRectangle.F90 not accessing all blocks in lnblocks?</font>
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<p class="x_MsoNormal"><span style="font-size:11.0pt">Hi all,</span></p>
<p class="x_MsoNormal"><span style="font-size:11.0pt"> </span></p>
<p class="x_MsoNormal"><span style="font-size:11.0pt">I am attempting to use gr_markInRectangle.F90 to define a region outside of which blocks are forced to derefine. This is different from the original use of gr_markInRectangle, but even before modification
I am not sure if the subroutine has access to all blocks. </span></p>
<p class="x_MsoNormal"><span style="font-size:11.0pt"> </span></p>
<p class="x_MsoNormal"><span style="font-size:11.0pt">gr_markInRectangle loops over all blocks and is called by Grid_markRefineSpecialized.F90 which I call from Grid_markRefineDerefine. To check if gr_markInRectangle is in fact looping over all blocks, I print
out “lnblocks” within the subroutine. In doing this, I only ever see block IDs 1-20 each FLASH cycle despite there being >1500 blocks. The initial grid has ~500 blocks and I have set the “contained” parameter in gr_markInRectangle such that any overlap should
trigger a refinement flag change. But, I do not see the refinement flag changes reflected in the Rectangle defined, adding to my suspicion that all blocks are not being looped over.</span></p>
<p class="x_MsoNormal"><span style="font-size:11.0pt"> </span></p>
<p class="x_MsoNormal"><span style="font-size:11.0pt">Has anyone successfully used gr_markInRectangle or have some advice on further diagnostics?</span></p>
<p class="x_MsoNormal"><span style="font-size:11.0pt"> </span></p>
<p class="x_MsoNormal"><span style="font-size:11.0pt">-Sean</span></p>
<p class="x_MsoNormal"> </p>
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