<html><head><meta http-equiv="content-type" content="text/html; charset=utf-8"></head><body style="overflow-wrap: break-word; -webkit-nbsp-mode: space; line-break: after-white-space;">Hi Jianhui,<div><br></div><div>It can be helpful to include the full setup line that you’re using and if possible the log file generate by FLASH. I’m guessing that you’re using the same setup as provided in the users guide and running with 8(?) mpi ranks.</div><div><br></div><div>This problem only sets up with a single block so the additional processors wouldn’t have anything to do and that could be the problem, but I don’t think that should be a problem.</div><div><br></div><div>I would also double check that the version of mpi that you built hypre with matches what you use to compile flash.<br id="lineBreakAtBeginningOfMessage"><div>
<div style="caret-color: rgb(0, 0, 0); color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;">*********************************************<br>Adam Reyes</div><br class="Apple-interchange-newline"><span><img alt="FLASH.jpg" src="cid:EA5A7E59-94B9-4162-879C-B52E774AEA24"></span><meta charset="UTF-8"><br style="caret-color: rgb(0, 0, 0); color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;"><span style="caret-color: rgb(0, 0, 0); color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; display: inline !important; float: none;">Code Group Leader, Flash Center for </span><span style="caret-color: rgb(0, 0, 0); color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; display: inline !important; float: none;">Computational Science</span><span style="caret-color: rgb(0, 0, 0); color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; display: inline !important; float: none;"> </span><span style="caret-color: rgb(0, 0, 0); color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; display: inline !important; float: none;"> </span><br style="caret-color: rgb(0, 0, 0); color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;"><span style="caret-color: rgb(0, 0, 0); color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; display: inline !important; float: none;">Research Scientist, Dept. of Physics and </span><span style="caret-color: rgb(0, 0, 0); color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; display: inline !important; float: none;">Astronomy</span><br style="caret-color: rgb(0, 0, 0); color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;"><span style="caret-color: rgb(0, 0, 0); color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; display: inline !important; float: none;">University of Rochester</span><br style="caret-color: rgb(0, 0, 0); color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;"><span style="caret-color: rgb(0, 0, 0); color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; display: inline !important; float: none;">River Campus: Bausch and Lomb Hall, </span><span style="caret-color: rgb(0, 0, 0); color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; display: inline !important; float: none;">369</span><span style="caret-color: rgb(0, 0, 0); color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; display: inline !important; float: none;"> </span><span style="caret-color: rgb(0, 0, 0); color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; display: inline !important; float: none;"> </span><br style="caret-color: rgb(0, 0, 0); color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;"><span style="caret-color: rgb(0, 0, 0); color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; display: inline !important; float: none;">500 Wilson Blvd. PO Box 270171, </span><span style="caret-color: rgb(0, 0, 0); color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; display: inline !important; float: none;">Rochester, NY 14627</span><br style="caret-color: rgb(0, 0, 0); color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;"><span style="caret-color: rgb(0, 0, 0); color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; display: inline !important; float: none;">Email</span><span style="caret-color: rgb(0, 0, 0); color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; display: inline !important; float: none;"> </span><span style="caret-color: rgb(0, 0, 0); color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; display: inline !important; float: none;">adam.reyes@rochester.edu</span><br style="caret-color: rgb(0, 0, 0); color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;"><span style="caret-color: rgb(0, 0, 0); color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; display: inline !important; float: none;">Web</span><span style="caret-color: rgb(0, 0, 0); color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; display: inline !important; float: none;"> </span><span style="caret-color: rgb(0, 0, 0); color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; display: inline !important; float: none;">https://flash.rochester.edu</span><br style="caret-color: rgb(0, 0, 0); color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;"><span style="caret-color: rgb(0, 0, 0); color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; display: inline !important; float: none;"> </span><span style="caret-color: rgb(0, 0, 0); color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; display: inline !important; float: none;">(he / him / his)</span><br style="caret-color: rgb(0, 0, 0); color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;"><span><img alt="FLASH-pride-sml.png" src="cid:CE45460D-2261-4A69-865C-5CF7BEACF620"></span><div style="caret-color: rgb(0, 0, 0); color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;"><br>*********************************************</div><div style="caret-color: rgb(0, 0, 0); color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;"><br></div><br class="Apple-interchange-newline">
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<div><br><blockquote type="cite"><div>On Sep 9, 2024, at 10:17 AM, 周剑晖 <805351271@qq.com> wrote:</div><br class="Apple-interchange-newline"><div><meta http-equiv="Content-Type" content="text/html; charset=GB18030"><span style="font-family: "lucida Grande", Verdana, "Microsoft YaHei";">Dear Flash users,</span><br style="font-family: "lucida Grande", Verdana, "Microsoft YaHei";"><br style="font-family: "lucida Grande", Verdana, "Microsoft YaHei";"><br style="font-family: "lucida Grande", Verdana, "Microsoft YaHei";"><span style="font-family: "lucida Grande", Verdana, "Microsoft YaHei";">I'm a new user of FLASH and </span><font face="lucida Grande, Verdana, Microsoft YaHei">I encountered the Segmentation fault when executing RadTrans Test Problems according to the User's guide. Here is part of this error (The complete error report is given in the attachment):</font><div><font face="lucida Grande, Verdana, Microsoft YaHei"><br></font></div><div><font face="lucida Grande, Verdana, Microsoft YaHei"><br></font></div><div><font face="lucida Grande, Verdana, Microsoft YaHei"><div> *** Wrote checkpoint file to mgdinfinite_hdf5_chk_0000 ****</div><div> *** Wrote plotfile to mgdinfinite_hdf5_plt_cnt_0000 ****</div><div> Initial plotfile written</div><div> Driver init all done</div><div>[localhost:47738:0:47738] Caught signal 11 (Segmentation fault: address not mapped to object at address 0xeb)</div><div>[localhost:47739:0:47739] Caught signal 11 (Segmentation fault: address not mapped to object at address 0xeb)</div><div>[localhost:47740:0:47740] Caught signal 11 (Segmentation fault: address not mapped to object at address 0xeb)</div><div>[localhost:47733:0:47733] Caught signal 11 (Segmentation fault: address not mapped to object at address 0xeb)</div><div>[localhost:47734:0:47734] Caught signal 11 (Segmentation fault: address not mapped to object at address 0xeb)</div><div>[localhost:47735:0:47735] Caught signal 11 (Segmentation fault: address not mapped to object at address 0xeb)</div><div>[localhost:47736:0:47736] Caught signal 11 (Segmentation fault: address not mapped to object at address 0xeb)</div><div>[localhost:47737:0:47737] Caught signal 11 (Segmentation fault: address not mapped to object at address 0xeb)</div><div>==== backtrace (tid: 47735) ====</div><div> 0 /lib64/libucs.so.0(ucs_handle_error+0x2e4) [0x7fca58102e44]</div><div> 1 /lib64/libucs.so.0(+0x2a4cd) [0x7fca581044cd]</div><div> 2 /lib64/libucs.so.0(+0x2a6aa) [0x7fca581046aa]</div><div> 3 /usr/lib64/openmpi/lib/libmpi.so.40(MPI_Comm_size+0x3b) [0x7fca5f53c80b]</div><div> 4 /home/admin/install/spack/spack-develop/opt/spack/linux-centos7-x86_64_v3/gcc-4.8.5/hypre-2.31.0-zosambog2ikxnxkzhmraomwhogrpuxdv/lib/libHYPRE-2.31.0.so(hypre_MPI_Comm_size+0x12) [0x7fca60113aa2]</div><div> 5 /home/admin/install/spack/spack-develop/opt/spack/linux-centos7-x86_64_v3/gcc-4.8.5/hypre-2.31.0-zosambog2ikxnxkzhmraomwhogrpuxdv/lib/libHYPRE-2.31.0.so(hypre_StructGridAssemble+0x6f) [0x7fca600f394f]</div><div> 6 /home/admin/install/spack/spack-develop/opt/spack/linux-centos7-x86_64_v3/gcc-4.8.5/hypre-2.31.0-zosambog2ikxnxkzhmraomwhogrpuxdv/lib/libHYPRE-2.31.0.so(hypre_SStructPGridAssemble+0x635) [0x7fca600632d5]</div><div> 7 /home/admin/install/spack/spack-develop/opt/spack/linux-centos7-x86_64_v3/gcc-4.8.5/hypre-2.31.0-zosambog2ikxnxkzhmraomwhogrpuxdv/lib/libHYPRE-2.31.0.so(HYPRE_SStructGridAssemble+0x158) [0x7fca6005ce48]</div><div> 8 /home/admin/install/spack/spack-develop/opt/spack/linux-centos7-x86_64_v3/gcc-4.8.5/hypre-2.31.0-zosambog2ikxnxkzhmraomwhogrpuxdv/lib/libHYPRE-2.31.0.so(hypre_sstructgridassemble_+0xc) [0x7fca60059efc]</div><div> 9 flash4() [0x50c15d]</div><div>10 flash4() [0x50ac00]</div><div>11 flash4() [0x42ed4e]</div><div>12 flash4() [0x46c7a5]</div><div>13 flash4() [0x416fcd]</div><div>14 flash4() [0x40a4c7]</div><div>15 /lib64/libc.so.6(+0x29590) [0x7fca5ee29590]</div><div>16 /lib64/libc.so.6(__libc_start_main+0x80) [0x7fca5ee29640]</div><div>17 flash4() [0x40a505]</div><div>=================================</div><div><br></div><div>If anyone has encountered this issue and knows how to fix it, please get back to me, thank you!</div><div><br></div><div><br></div><div>Best regards,<br><br>Jianhui Zhou<br>Doctoral candidate<br>Huazhong University of Science and Technology</div><div><br></div></font></div><span id="cid:30F3993A-0602-43C9-BA58-98F092799219"><error.txt></span><span id="cid:38A0AE60-0F5F-41BB-8F29-9DCD3A9921ED"><flash.par></span>_______________________________________________<br>flash-users mailing list<br>flash-users@flash.rochester.edu<br><br>For list info, including unsubscribe:<br>https://flash.rochester.edu/mailman/listinfo/flash-users<br></div></blockquote></div><br></div></body></html>