[FLASH-BUGS] problems running flash3

[Anshu Dubey]

Do you by any chance have more than one installation of MPI ?
Sometimes such weird errors show up when the application is
built against one installation, but the mpirun is picked up from another.

On Mon, Jan 24, 2011 at 1:06 AM, Manami Sasaki <
sasaki at astro.uni-tuebingen.de> wrote:

>
> Hi,
>
> I have downloaded FLASH3.3 and also installed mpich and hdf5.
>
>> ./setup Sedov -auto
>>
> works fine. However, if I try to run flash with
>
>> mpirun -np 1 /home/sasaki/soft/flash/FLASH3.3/object/flash3
>>
> I get the result shown below and could not figure out how to
> revolve this. I'm working on a PC with openSUSE 11.1 (Linux
> 2.6.27.56-0.1-default x86_64) installed.
>
> Thank you for your help.
> Best regards,
> Manami
>
>
> ---------------------------------------------------------------
> Fatal error in MPI_Allreduce: Internal MPI error!, error stack:
> MPI_Allreduce(826).......: MPI_Allreduce(sbuf=0x7fffa0b3d938,
> rbuf=0x7fffa0b3d93c, count=1, MPI_DOUBLE_PRECISION, MPI_MIN,
> MPI_COMM_WORLD)
> failed
> MPIR_Allreduce_impl(684).:
> MPIR_Allreduce_intra(279):
> MPIR_Localcopy(349)......: memcpy arguments alias each other,
> dst=0x7fffa0b3d93c src=0x7fffa0b3d938 len=8
>  WARNING : Adaptive Grid did not find any refinement variables
>  MaterialProperties initialized
>  Cosmology initialized
>  Source terms initialized
>  iteration, no. not moved =            0           0
>  refined: total leaf blocks =            1
>  refined: total blocks =            1
>  starting MORTON ORDERING
>  tot_blocks after            1
>  max_blocks 2           1
>  min_blocks 2           1
>  INFO: Grid_fillGuardCells is ignoring masking.
>  Finished with Grid_initDomain, no restart
>  Ready to call Hydro_init
>  Info: Hydro_init has set hy_specialFluxVar to            3
>  Hydro initialized
>  Gravity initialized
> rank 0 in job 9  aitp28_40893   caused collective abort of all ranks
>  exit status of rank 0: killed by signal 9
>
>


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Anshu Dubey
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