[FLASH-USERS] error in compiling Sedov example

[Paul M. Rich]

Justin,

I've seen things like this happen like this before and these look like 
they are from libpthread.  Effectively it is a dependency of a 
dependency.  Are you linking statically or dynamically in your 
Makefile.h?  You can try manually including that library in your 
Makefile.h to ensure that these symbols are defined.

Does that help?

Paul Rich
--------------------------------
richp at flash.uchicago.edu
ASC Flash Center
University of Chicago


Parsons, Justin T wrote:
> Greetings!
>
> I'm in the process of testing my FLASH install and familiarizing myself with the code.  I've been trying to compile the Sedov problem but keep running in to this error:
>
> --ERROR--
> /home/jussn/mpich2-install/lib/libmpich.a(simple_pmi.o): In function `PMI_Init':
> simple_pmi.c:(.text+0x1fcd): warning: Using 'gethostbyname' in statically linked applicatio
> ns requires at runtime the shared libraries from the glibc version used for linking
> /usr/lib/gcc/i486-linux-gnu/4.2.3/../../../../lib/librt.a(aio_misc.o): In function `__aio_e
> nqueue_request':
> (.text+0x1c3): undefined reference to `pthread_getschedparam'
> /usr/lib/gcc/i486-linux-gnu/4.2.3/../../../../lib/librt.a(aio_misc.o): In function `__aio_e
> nqueue_request':
> (.text+0x2dd): undefined reference to `pthread_cond_signal'
> /usr/lib/gcc/i486-linux-gnu/4.2.3/../../../../lib/librt.a(aio_misc.o): In function `__aio_e
> nqueue_request':
> (.text+0x3f7): undefined reference to `pthread_attr_init'
> /usr/lib/gcc/i486-linux-gnu/4.2.3/../../../../lib/librt.a(aio_misc.o): In function `__aio_e
> nqueue_request':
> (.text+0x407): undefined reference to `pthread_attr_setdetachstate'
> /usr/lib/gcc/i486-linux-gnu/4.2.3/../../../../lib/librt.a(aio_misc.o): In function `__aio_e
> nqueue_request':
> (.text+0x41c): undefined reference to `pthread_attr_setstacksize'
> /usr/lib/gcc/i486-linux-gnu/4.2.3/../../../../lib/librt.a(aio_misc.o): In function `__aio_e
> nqueue_request':
> (.text+0x489): undefined reference to `pthread_attr_destroy'
> /usr/lib/gcc/i486-linux-gnu/4.2.3/../../../../lib/librt.a(aio_misc.o): In function `handle_
> fildes_io':
> (.text+0x676): undefined reference to `pthread_getschedparam'
> /usr/lib/gcc/i486-linux-gnu/4.2.3/../../../../lib/librt.a(aio_misc.o): In function `handle_
> fildes_io':
> (.text+0x6bd): undefined reference to `pthread_setschedparam'
> /usr/lib/gcc/i486-linux-gnu/4.2.3/../../../../lib/librt.a(aio_misc.o): In function `handle_
> fildes_io':
> (.text+0x790): undefined reference to `pthread_cond_signal'
> /usr/lib/gcc/i486-linux-gnu/4.2.3/../../../../lib/librt.a(aio_misc.o): In function `handle_
> fildes_io':
> (.text+0x9d1): undefined reference to `pthread_attr_init'
> /usr/lib/gcc/i486-linux-gnu/4.2.3/../../../../lib/librt.a(aio_misc.o): In function `handle_
> fildes_io':
> (.text+0x9e1): undefined reference to `pthread_attr_setdetachstate'
> /usr/lib/gcc/i486-linux-gnu/4.2.3/../../../../lib/librt.a(aio_misc.o): In function `handle_
> fildes_io':
> (.text+0xa7c): undefined reference to `pthread_cond_timedwait'
> /usr/lib/gcc/i486-linux-gnu/4.2.3/../../../../lib/librt.a(aio_notify.o): In function `__aio
> _notify_only':
> (.text+0xa9): undefined reference to `pthread_attr_init'
> /usr/lib/gcc/i486-linux-gnu/4.2.3/../../../../lib/librt.a(aio_notify.o): In function `__aio
> _notify_only':
> (.text+0xb9): undefined reference to `pthread_attr_setdetachstate'
> collect2: ld returned 1 exit status
> make: *** [flash3] Error 1
> --ERROR--
>
> I'm not quite sure where to go from here.  Makefile.h in my "object" dir has the correct paths and, I believe, I've installed all necessary libraries and deps.  Any tips?
>
> System is Ubuntu 8.04 with AMD 32bit.
>
>
> Cheers
> Justin Parsons
> http://jussn.beevomit.org
>