[FLASH-USERS] ERROR in mpi_morton_bnd_prol
Marco Mazzuoli
marco.mazzuoli at unige.it
Fri Jan 18 11:47:00 EST 2013
Dear Flash users,
I am trying to run Flash on a bluegene-type supercomputer.
The details of the present run are:
#procs=1024 on #64 nodes (#16procs per node).
The domain is rectangular.
Block size = 32x32x32 computational points
Max refinement level = 5
The whole domain is refined at level = 5 such that N°blocks=1+8+64+512+4096=4681
Max_blocks per core = 4
Do you know what the initialization error visualized in the standard output and proposed in the following, could depend on?
-----------------------------------------------------------------------------------------------------------------------
RuntimeParameters_read: ignoring unknown parameter "igrav"...
RuntimeParameters_read: ignoring unknown parameter "mgrid_max_iter_change"...
RuntimeParameters_read: ignoring unknown parameter "mgrid_solve_max_iter"...
RuntimeParameters_read: ignoring unknown parameter "mgrid_print_norm"...
RuntimeParameters_read: ignoring unknown parameter "msgbuffer"...
RuntimeParameters_read: ignoring unknown parameter "eint_switch"...
RuntimeParameters_read: ignoring unknown parameter "order"...
RuntimeParameters_read: ignoring unknown parameter "slopeLimiter"...
RuntimeParameters_read: ignoring unknown parameter "LimitedSlopeBeta"...
RuntimeParameters_read: ignoring unknown parameter "charLimiting"...
RuntimeParameters_read: ignoring unknown parameter "use_avisc"...
RuntimeParameters_read: ignoring unknown parameter "use_flattening"...
RuntimeParameters_read: ignoring unknown parameter "use_steepening"...
RuntimeParameters_read: ignoring unknown parameter "use_upwindTVD"...
RuntimeParameters_read: ignoring unknown parameter "RiemannSolver"...
RuntimeParameters_read: ignoring unknown parameter "entropy"...
RuntimeParameters_read: ignoring unknown parameter "shockDetect"...
MaterialProperties initialized
Cosmology initialized
Source terms initialized
Cosmology initialized
Source terms initialized
iteration, no. not moved = 0 0
refined: total leaf blocks = 1
refined: total blocks = 1
starting MORTON ORDERING
tot_blocks after 1
max_blocks 2 1
min_blocks 2 0
Finished initialising block: 1
INFO: Grid_fillGuardCells is ignoring masking.
iteration, no. not moved = 0 0
refined: total leaf blocks = 8
refined: total blocks = 9
iteration, no. not moved = 0 7
iteration, no. not moved = 1 0
refined: total leaf blocks = 64
refined: total blocks = 73
iteration, no. not moved = 0 70
iteration, no. not moved = 1 7
iteration, no. not moved = 2 0
refined: total leaf blocks = 512
refined: total blocks = 585
ERROR
in mpi_morton_bnd_prol : guard block starting
index -3 not larger than lnblocks 1 processor no. 8 maxblocks_alloc
40
ERROR in mpi_morton_bnd_prol : guard block
starting index -3 not larger than lnblocks 1 processor no. 496
maxblocks_alloc 40
ERROR in
mpi_morton_bnd_prol : guard block starting index
-3 not larger than lnblocks 1 processor no. 569 maxblocks_alloc 40
ERROR
in mpi_morton_bnd_prol : guard block starting
index -3 not larger than lnblocks 1 processor no. 172
maxblocks_alloc 40
ERROR in
mpi_morton_bnd_prol : guard block starting index
-12 not larger than lnblocks 1 processor no. 368 maxblocks_alloc 40
ERROR
in mpi_morton_bnd_prol : guard block starting
index -12 not larger than lnblocks 1 processor no. 189
maxblocks_alloc 40
...
...
...
Abort(1076419107) on node 442 (rank 442 in
comm -2080374784): application called MPI_Abort(comm=0x84000000,
1076419107) - process 442
-----------------------------------------------------------------------------------------------------------------------
Thank you in advance.
Sincerely,
Marco Mazzuoli
Ing. Marco Mazzuoli
Dipartimento di Ingegneria
delle Costruzioni, dell'Ambiente e
del Territorio (DICAT)
via Montallegro 1
16145 GENOVA-ITALY
tel. +39 010 353 2497
cell. +39 338 7142904
e-mail marco.mazzuoli at unige.it
marco.mazzuoli84 at gmail.com
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