[FLASH-USERS] Problems with MHD simulation
Ernesto Zurbriggen
ernesto at mail.oac.uncor.edu
Wed Feb 12 13:55:35 EST 2014
Hi all!
I have my own MHD simulation that it seems to work well in FLASH4.
The new FLASH4.2 release bring me good news because of the two new
optimizations of the unsplit solvers, Hydro_Unsplit and MHD_StaggeredMesh,
so let's work!
Now I'm running my simulation in FLASH4.2 and I'm having some problems
that I never had before.
While in FLASH4 every thing is okay all time (regardless of UG, AMR,
MHD_StaggeredMesh, etc), FLASH4.2 often (although no always) gives me
the error shown below (especially using MPI and AMR).
I know it's a hard problem to diagnose.
Does anybody have an idea of what is happening or what I'm doing wrong?
Thanks all.
!................................
ernesto at ntb:~/flash4.2/object$ mpirun -np 4 ./flash4
MaterialProperties initialized
Cosmology initialized
Source terms initialized
iteration, no. not moved = 0 0
refined: total leaf blocks = 4
refined: total blocks = 5
INFO: Grid_fillGuardCells is ignoring masking.
iteration, no. not moved = 0 3
iteration, no. not moved = 1 0
refined: total leaf blocks = 10
refined: total blocks = 13
iteration, no. not moved = 0 4
iteration, no. not moved = 1 0
refined: total leaf blocks = 31
refined: total blocks = 41
iteration, no. not moved = 0 17
iteration, no. not moved = 1 1
iteration, no. not moved = 2 0
refined: total leaf blocks = 76
refined: total blocks = 101
[flash_convert_cc_hook] PE= 2, ivar= 14, why=1
Trying to convert non-zero mass-specific variable to per-volume
form, but dens is zero!
DRIVER_ABORT: Trying to convert non-zero mass-specific variable to
per-volume form, but dens is zero!
--------------------------------------------------------------------------
MPI_ABORT was invoked on rank 2 in communicator MPI_COMM_WORLD
with errorcode 1.
NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes.
You may or may not see output from other processes, depending on
exactly when Open MPI kills them.
!................................
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