[FLASH-USERS] MPI_abort flash4
Hava Turkakin
turkakin at ualberta.ca
Thu Jul 24 16:43:47 EDT 2014
Hi
I am running flash4 with a program I used for flash3 and wasa working fine.
It runs up to some point and ends with a large errro message starting with
PI_ABORT was invoked on rank 7 in communicator MPI_COMM_WORLD
with errorcode 1.
NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes.
You may or may not see output from other processes, depending on
exactly when Open MPI kills them.
--------------------------------------------------------------------------
and ending with
forrtl: error (78): process killed (SIGTERM)
Image PC Routine Line Source
libmthca-rdmav2.s 00002AAAAB0EBB69 Unknown Unknown Unknown
mca_btl_openib.so 00002B57E116292D Unknown Unknown Unknown
libmpi.so.1 00002B57DC40E0E6 Unknown Unknown Unknown
libmpi.so.1 00002B57DC3409B4 Unknown Unknown Unknown
mca_coll_tuned.so 00002B57E264F8CE Unknown Unknown Unknown
mca_coll_tuned.so 00002B57E2658528 Unknown Unknown Unknown
mca_coll_tuned.so 00002B57E264FC7F Unknown Unknown Unknown
libmpi.so.1 00002B57DC34F97F Unknown Unknown Unknown
libmpi_f77.so.1 00002B57DC0CD083 Unknown Unknown Unknown
flash4 00000000004397A7 Unknown Unknown Unknown
flash4 0000000000500700 Unknown Unknown Unknown
flash4 000000000044CDE9 Unknown Unknown Unknown
flash4 0000000000428E51 Unknown Unknown Unknown
flash4 000000000042FE89 Unknown Unknown Unknown
flash4 0000000000423D4C Unknown Unknown Unknown
libc.so.6 000000367081D994 Unknown Unknown Unknown
flash4 0000000000423C49 Unknown Unknown Unknown
[cl1n126:19225] 1 more process has sent help message help-mpi-api.txt
/ mpi-abort
[cl1n126:19225] Set MCA parameter "orte_base_help_aggregate" to 0 to
see all help / error messages
139,1 Bot
**********************************************************************************************************
I know this about refinement. If I set lref_min=1, lref_max=6 it works
fine. But lref_min=4, lrefmax=8 dies after some point in time. I tried
to set up with usm, 8wave, increase maxblocks, all ended with the same
problem.
I want to use this refinement since resolution looks very well with
it. Any help is appreciated. Thank you
--
Hava Turkakin
PhD Candidate
University of Alberta
Space Physics Research Group
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