[FLASH-USERS] compilation problems with FLASH4.2.1

[Cristian Giovanny Bernal]

Hi Flash-developers,

I'm trying to install FLASH4.2.1 in a cluster, but I'm having trouble
compiling. I thinkthe error ir related with HDF5.

The machine OS:

GNU/Linux (Debian)

GCC 4.3.2-1.1 / mpich 1.2.7

HDF5:

hdf5-1.8.10-linux-x86_64-static

hdf5-1.8.13-linux-x86_64-shared

the error is:

/usr/bin/ld: skipping incompatible /opt/hdf5-1.8.10/lib/libhdf5.a when
searching for -lhdf5


Now, when we try to compile with an earlier version of HDF5:

libhdf5-mpich-1.6.6-0

libhdf5-serial-1.6.6-0

the error is:

$ make
rm -f reorder.sh
/usr/bin/mpif90 -ggdb -c -O2 -fdefault-real-8 -fdefault-double-8
-Wuninitialized  -DMAXBLOCKS=1000 -DNXB=8 -DNYB=8 -DNZB=1 -DN_DIM=2
gr_xyzToBlock.F90
gr_xyzToBlock.F90: In function ‘gr_xyztoblock’:
gr_xyzToBlock.F90:54: warning: ‘proc’ is used uninitialized in this function
gr_xyzToBlock.F90:55: warning: ‘blk’ is used uninitialized in this function
/usr/bin/mpicc -I/usr/lib/include -DH5_USE_16_API -ggdb -c -O2
-Wuninitialized -D_FORTIFY_SOURCE=2 -DMAXBLOCKS=1000 -DNXB=8 -DNYB=8
-DNZB=1 -DN_DIM=2 io_attribute.c
In file included from io_h5_attribute.h:7,
                 from io_attribute.h:13,
                 from io_attribute.c:1:
io_h5_type.h:7:18: error: hdf5.h: Arquivo ou diretório não encontrado
In file included from io_h5_attribute.h:7,
                 from io_attribute.h:13,
                 from io_attribute.c:1:
io_h5_type.h:10: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or ‘__attribute__’
before ‘io_h5_type_hid_primitive’
io_h5_type.h:11: error: expected ‘;’, ‘,’ or ‘)’ before ‘hType’
io_h5_type.h:12: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or ‘__attribute__’
before ‘io_h5_type_create_string’
io_h5_type.h:13: error: expected ‘;’, ‘,’ or ‘)’ before ‘hType’
make: ** [io_attribute.o] Erro 1


Has anyone had the same problem? Any idea how to fix this?

thank you very much
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