[FLASH-USERS] error in compiling the flash for laserslab problem

[chandra sekhar Shukla]

Hi everyone & happy new year,

Firstly I am using the setup script, as detailed in the user guide:

 ./setup -auto LaserSlab -2d -nxb=16 -nyb=16 +hdf5typeio \
> species=cham,targ +mtmmmt +laser +uhd3t +mgd mgd_meshgroups=6 \
> -parfile=example.par


I am running into this error:

io_h5file_interface.o: In function `io_h5init_file_':
/home/chandra/Downloads/FLASH4.4/object/io_h5file_interface.c:165:
undefined reference to `H5Pset_fapl_mpio'
io_h5file_interface.o: In function `io_h5open_file_for_read_':
/home/chandra/Downloads/FLASH4.4/object/io_h5file_interface.c:273:
undefined reference to `H5Pset_fapl_mpio'
io_h5read_unknowns.o: In function `io_h5read_unknowns_':
/home/chandra/Downloads/FLASH4.4/object/io_h5read_unknowns.c:53: undefined
reference to `H5Pset_dxpl_mpio'
io_h5write_unknowns.o: In function `io_h5write_unknowns_':
/home/chandra/Downloads/FLASH4.4/object/io_h5write_unknowns.c:156:
undefined reference to `H5Pset_dxpl_mpio'
io_h5write_unknowns_sp.o: In function `io_h5write_unknowns_sp_':
/home/chandra/Downloads/FLASH4.4/object/io_h5write_unknowns_sp.c:237:
undefined reference to `H5Pset_dxpl_mpio'
/usr/local/hypre/lib/libHYPRE.a(par_gsmg.o): In function
`hypre_BoomerAMGFitVectors':
par_gsmg.c:(.text+0x1d9d): undefined reference to `hypre_dgels'
/usr/local/hypre/lib/libHYPRE.a(par_relax.o): In function
`hypre_BoomerAMGRelax':
par_relax.c:(.text+0xf6d5): undefined reference to `hypre_dgetrf'
par_relax.c:(.text+0xf725): undefined reference to `hypre_dgetrs'
/usr/local/hypre/lib/libHYPRE.a(schwarz.o): In function
`hypre_AMGNodalSchwarzSmoother':
schwarz.c:(.text+0xc00): undefined reference to `hypre_dpotrf'
schwarz.c:(.text+0xe9e): undefined reference to `hypre_dpotrf'
/usr/local/hypre/lib/libHYPRE.a(schwarz.o): In function
`hypre_ParMPSchwarzSolve':
schwarz.c:(.text+0x1e30): undefined reference to `hypre_dgetrs'
schwarz.c:(.text+0x1e8c): undefined reference to `hypre_dpotrs'
schwarz.c:(.text+0x25be): undefined reference to `hypre_dgetrs'
schwarz.c:(.text+0x261a): undefined reference to `hypre_dpotrs'
/usr/local/hypre/lib/libHYPRE.a(schwarz.o): In function
`hypre_MPSchwarzSolve':
schwarz.c:(.text+0x2e34): undefined reference to `hypre_dgetrs'
schwarz.c:(.text+0x2e84): undefined reference to `hypre_dpotrs'
schwarz.c:(.text+0x31d6): undefined reference to `hypre_dgetrs'
schwarz.c:(.text+0x3226): undefined reference to `hypre_dpotrs'
/usr/local/hypre/lib/libHYPRE.a(schwarz.o): In function
`hypre_MPSchwarzCFSolve':
schwarz.c:(.text+0x372b): undefined reference to `hypre_dgetrs'
schwarz.c:(.text+0x377b): undefined reference to `hypre_dpotrs'
schwarz.c:(.text+0x3b21): undefined reference to `hypre_dgetrs'
schwarz.c:(.text+0x3b71): undefined reference to `hypre_dpotrs'
/usr/local/hypre/lib/libHYPRE.a(schwarz.o): In function
`hypre_MPSchwarzFWSolve':
schwarz.c:(.text+0x4015): undefined reference to `hypre_dgetrs'
schwarz.c:(.text+0x4065): undefined reference to `hypre_dpotrs'
/usr/local/hypre/lib/libHYPRE.a(schwarz.o): In function
`hypre_MPSchwarzCFFWSolve':
schwarz.c:(.text+0x457e): undefined reference to `hypre_dgetrs'
schwarz.c:(.text+0x45ce): undefined reference to `hypre_dpotrs'
/usr/local/hypre/lib/libHYPRE.a(schwarz.o): In function
`hypre_AMGCreateDomainDof':
schwarz.c:(.text+0x63a5): undefined reference to `hypre_dgetrf'
schwarz.c:(.text+0x63de): undefined reference to `hypre_dpotrf'
/usr/local/hypre/lib/libHYPRE.a(schwarz.o): In function
`hypre_AdSchwarzSolve':
schwarz.c:(.text+0x88cb): undefined reference to `hypre_dgetrs'
schwarz.c:(.text+0x8912): undefined reference to `hypre_dpotrs'
/usr/local/hypre/lib/libHYPRE.a(schwarz.o): In function
`hypre_AdSchwarzCFSolve':
schwarz.c:(.text+0x8d0f): undefined reference to `hypre_dgetrs'
schwarz.c:(.text+0x8d56): undefined reference to `hypre_dpotrs'
/usr/local/hypre/lib/libHYPRE.a(schwarz.o): In function
`hypre_ParAdSchwarzSolve':
schwarz.c:(.text+0x965a): undefined reference to `hypre_dgetrs'
schwarz.c:(.text+0x96b6): undefined reference to `hypre_dpotrs'
/usr/local/hypre/lib/libHYPRE.a(schwarz.o): In function
`hypre_ParAMGCreateDomainDof':
schwarz.c:(.text+0xbd47): undefined reference to `hypre_dgetrf'
schwarz.c:(.text+0xbd80): undefined reference to `hypre_dpotrf'
/usr/local/hypre/lib/libHYPRE.a(ParaSails.o): In function
`ComputeValuesSym':
ParaSails.c:(.text+0x211b): undefined reference to `hypre_dpotrf'
ParaSails.c:(.text+0x2176): undefined reference to `hypre_dpotrs'
/usr/local/hypre/lib/libHYPRE.a(ParaSails.o): In function
`ComputeValuesNonsym':
ParaSails.c:(.text+0x2973): undefined reference to `hypre_dgels'
collect2: error: ld returned 1 exit status
make: *** [flash4] Error 1
chandra at chandra-Inspiron-3558:~/Downloads/FLASH4.4/object$
Does anyone help me to getting the soulation of this?

thanks in advance.

With Warm Regards,

CHANDRASEKHAR SHUKLA
INSTITUTE FOR PLASMA RESEARCH
GANDHINAGAR,GUJRAT, INDIA
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