[FLASH-USERS] Some Problem when restart the StirTurb
Tristan
juwj at mail2.sysu.edu.cn
Mon May 24 12:18:44 EDT 2021
Hello, everyone:
When I run the Flash code with the StirTrub unit for my turbulence simulation, it works well.But when I want to restart from a checkpointfile , something went wrong.
To restart from a CheckPointFile, I changed my flash.par :
```
restart = .true.
checkpointFileNumber = 5
plotFileNumber = 10
```
The total number of CheckPointFile is 10, and for plotfile is 20 when I run the code first time. So I just want to restart from half the number
That is the error I met :
```
[io_readData] Opening driventurb_3d_hdf5_chk_0005 for restart
Progress: seed length = 0
Random seed =
nmodes = 188
Source terms initialized
Finished with Grid_initDomain, restart
Ready to call Hydro_init
Hydro initialized
Gravity initialized
Initial dt verified
*** Wrote plotfile to driventurb_3d_forced_hdf5_plt_cnt_0000 ****
Initial plotfile written
Driver init all done
n t dt ( x, y, z) |
106 2.5417E+00 4.9986E-02 ( 999. , 999. , 999. ) |
107 2.5917E+00 9.9972E-02 ( 999. , 999. , 999. ) |
108 2.6916E+00 1.9994E-01 ( 999. , 999. , 999. ) |
*** Wrote plotfile to driventurb_3d_hdf5_plt_cnt_0010 ****
109 2.8916E+00 3.9989E-01 ( 999. , 999. , 999. ) |
*** Wrote plotfile to driventurb_3d_hdf5_plt_cnt_0011 ****
110 3.2915E+00 7.9977E-01 ( 999. , 999. , 999. ) |
*** Wrote checkpoint file to driventurb_3d_hdf5_chk_0006 ****
*** Wrote plotfile to driventurb_3d_hdf5_plt_cnt_0012 ****
111 4.0912E+00 1.5995E+00 ( 999. , 999. , 999. ) |
*** Wrote checkpoint file to driventurb_3d_hdf5_chk_0007 ****
*** Wrote plotfile to driventurb_3d_hdf5_plt_cnt_0013 ****
112 5.6908E+00 3.1991E+00 ( 999. , 999. , 999. ) |
*** Wrote checkpoint file to driventurb_3d_hdf5_chk_0008 ****
*** Wrote plotfile to driventurb_3d_hdf5_plt_cnt_0014 ****
113 8.8899E+00 6.3982E+00 ( 999. , 999. , 999. ) |
*** Wrote checkpoint file to driventurb_3d_hdf5_chk_0009 ****
*** Wrote plotfile to driventurb_3d_hdf5_plt_cnt_0015 ****
114 1.5288E+01 1.2796E+01 ( 999. , 999. , 999. ) |
*** Wrote checkpoint file to driventurb_3d_hdf5_chk_0010 ****
exiting: reached max SimTime
*** Wrote plotfile to driventurb_3d_forced_hdf5_plt_cnt_0001 ****
At line 25 of file Stir_finalize.F90
Fortran runtime error: Attempt to DEALLOCATE unallocated 'st_randseed'
At line 25 of file Stir_finalize.F90
Fortran runtime error: Attempt to DEALLOCATE unallocated 'st_randseed'
At line 25 of file Stir_finalize.F90
Fortran runtime error: Attempt to DEALLOCATE unallocated 'st_randseed'
At line 25 of file Stir_finalize.F90
Fortran runtime error: Attempt to DEALLOCATE unallocated 'st_randseed'
At line 25 of file Stir_finalize.F90
Fortran runtime error: Attempt to DEALLOCATE unallocated 'st_randseed'
At line 25 of file Stir_finalize.F90
Fortran runtime error: Attempt to DEALLOCATE unallocated 'st_randseed'
At line 25 of file Stir_finalize.F90
Fortran runtime error: Attempt to DEALLOCATE unallocated 'st_randseed'
At line 25 of file Stir_finalize.F90
Fortran runtime error: Attempt to DEALLOCATE unallocated ‘st_randseed'
```
The file Stir_finalize.F90 is below:
!!****if* source/physics/sourceTerms/Stir/StirMain/Generate/Stir_finalize
!!
!! NAME
!!
!! Stir_finalize
!!
!! SYNOPSIS
!!
!! call Stir_finalize()
!!
!! ARGUMENTS
!!
!! none
!!
!! DESCRIPTION
!!
!! Clean up the Stir unit
!!
!!***
subroutine Stir_finalize()
use Stir_data, ONLY : st_randseed, st_reproducible, &
st_saveReproducible, st_randomSaveUnit
implicit none
deallocate(st_randseed) !!!!!!!! This is the 25th line.
if(st_reproducible.or.st_saveReproducible)&
close(unit=st_randomSaveUnit)
return
end subroutine Stir_finalize
I have updated the log file for you to check my work. If someone met the some questions, let me know.
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