[FLASH-USERS] flmake not picking up files in proj/simulations

[Roman Yurchak]

Hi Jon,

I'll reply for Anthony. After you do the flmake setup, for instance
the proj/setup/Simulation_init.F90 should be a symbolic link to
proj/simulations/Sedov/Simulation_init.F90 . Any changes you make there 
then will be
included when you recompile the flash4 binary.

In your case however it looks like the "flmake setup" did not recognize 
that there were a local simulation directory.
When  you do the setup it outputs a list of paths that should contain  
simulations/Sedov
and not include Simulation/SimulationMain/Sedov.
You did the flmake setup Sedov from inside of the proj directory right? 
That should work.
Otherwise you can try renaming your local Sedov directory to say Sedov2 
and do a
   flmake setup Sedov2  etc..
in order to be sure.

Best,
-- 
Roman
On 2014-06-13 21:53, Slavin, Jonathan wrote:
> Hi Anthony,
>
>  So lets call my project directiory proj  What I thought I could do
> is just edit the files under proj/simulations/Sedov/ and then do
> flmake build -j 4
> flmake run -n 4 -m "some comment about the run"
>
> Ive been doing that and by varying parameters via editing flashrc.py
> in proj/.  That worked fine.  But then when I edited
> proj/simulations/Sedov/Simulation_init.F90 including a write
> statement, I found, that it wasnt using that file but instead was
> using the version in 
> FLASH4.2.1/source/Simulation/SimulationMain/Sedov
>
>
> I assume that its not necessary to do "flmake setup" each time -- 
> that
> would defeat the purpose.  The docs say that flmake is supposed to
> look under proj/simulations/Sedov first.  Im thinking that maybe
> something in my setup could be wrong, maybe Im missing something in
> flash_desc.json?  Its hard to tell.
>
> Jon
>
>  On Fri, Jun 13, 2014 at 3:31 PM, Anthony Scopatz
> <scopatz at flash.uchicago.edu [8]> wrote:
>
>> Hi Jon, 
>>
>> Where are you running flmake from?  Could you post the commands to
>> reproduce this?  As I recall, flmake first looks in your local
>> simulations directory and then looks in the flash source dir.
>>
>> Be Well
>> Anthony
>>
>> On Fri, Jun 13, 2014 at 10:45 AM, Slavin, Jonathan
>> <jslavin at cfa.harvard.edu [4]> wrote:
>>
>>> Hi,
>>>
>>> Maybe this is another issue for Anthony Scopatz, or maybe someone
>>> else who has used flmake can help.
>>>
>>> For some reason flmake build is not picking up routines that are
>>> under (project directory)/simulations.  In particular I altered
>>> Simulation_init.F90 under my (project directory)/simulations/Sedov
>>> directory and it was not picked up -- as demonstrated by the fact
>>> that a write statement didnt produce output.  Also, as it turns
>>> out, I had a bug in the program which showed up when I copied my
>>> version over to FLASH4.2.1/source/Simulation/SimulationMain/Sedov
>>> at which point it was picked up by flmake build.
>>>
>>> Any ideas what could cause that?  Where does flmake get its
>>> search path?
>>>
>>> Jon

-- 
Roman Yurchak
PhD student
Laboratoire LULI
Ecole Polytechnique, France