[FLASH-USERS] hdf5.h not found even though it is included in system path

Reyes, Adam adam.reyes at rochester.edu
Tue Feb 8 16:26:01 EST 2022


Hi Jake,

FLASH will look for it in $(HDFT_PATH)/include. Try HDF5_PATH=/usr instead.

Adam

> On Feb 8, 2022, at 3:41 PM, Jake Allyn <allyn at acta-sh.com> wrote:
> 
> Hello,
> 
> I am trying to run the Sedov test from the users guide. I'm using Flash 6.4.1 on Debian.
> 
> I have hdf5.h in my /usr/include folder, and I have my /usr/include folder in my $PATH variable. In Makefile.h, I have set the path to HDF5 as /usr/include. When I try to run the "make" command, I get the following error:
> 
> ---------------------------
> hdf5_flash.h:34:10: fatal error: hdf5.h: No such file or directory
>  #include <hdf5.h>
>           ^~~~~~~~
> compilation terminated.
> make: *** [Makefile:124: io_attribute.o] Error 1
> --------------------------
> 
> Any help would be appreciated.
> 
> Thanks,
> Jake Allyn
> ACTA-SH
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