[FLASH-USERS] hdf5.h not found even though it is included in system path

Jake Allyn allyn at acta-sh.com
Thu Feb 17 15:10:17 EST 2022


Adam,

I tried changing the HDF5 Path in Makefile.h to /usr instead of
/usr/include but I'm still getting the same error. Is there a different
place that I need to change the path?

Jake

On Tue, Feb 8, 2022 at 1:26 PM Reyes, Adam <adam.reyes at rochester.edu> wrote:

> Hi Jake,
>
> FLASH will look for it in $(HDFT_PATH)/include. Try HDF5_PATH=/usr instead.
>
> Adam
>
> > On Feb 8, 2022, at 3:41 PM, Jake Allyn <allyn at acta-sh.com> wrote:
> >
> > Hello,
> >
> > I am trying to run the Sedov test from the users guide. I'm using Flash
> 6.4.1 on Debian.
> >
> > I have hdf5.h in my /usr/include folder, and I have my /usr/include
> folder in my $PATH variable. In Makefile.h, I have set the path to HDF5 as
> /usr/include. When I try to run the "make" command, I get the following
> error:
> >
> > ---------------------------
> > hdf5_flash.h:34:10: fatal error: hdf5.h: No such file or directory
> >  #include <hdf5.h>
> >           ^~~~~~~~
> > compilation terminated.
> > make: *** [Makefile:124: io_attribute.o] Error 1
> > --------------------------
> >
> > Any help would be appreciated.
> >
> > Thanks,
> > Jake Allyn
> > ACTA-SH
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