[FLASH-USERS] Has anyone used FLASH3 on Colosse or Guillimin at Calcul-Quebec?

[David]

Hey Mark,

Good to know! Though I ended up just compiling hdf5 1.6.10 myself. I did some tests and it seems to be working, so I'm ready to start trying to submit real jobs anyway :)

Cheers,
-Dave


On 2013-10-03, at 13:28 , Mark L Richardson <Mark.L.Richardson at asu.edu> wrote:

> Hi Dave,
> 
> You can use version 1.8 of HDF, just make sure you say to use the 1.6 API in your sites Makefile.
> 
> For example, on Stampede I have:
> 
> F90FLAGS = -I ${TACC_HDF5_INC} -DH5_USE_16_API
> CFLAGS_HDF5  = -I ${TACC_HDF5_INC} -DH5_USE_16_API
> 
> Good luck,
>   -Mark
> 
> 
> 
> On Thu, Oct 3, 2013 at 6:53 AM, David <david.john.williamson at gmail.com> wrote:
> Hi,
> 
> You're right - I've got an "mvapich2/1.6-intel" module, ifort etc. There are intel hdf5 1.8.x modules, but not any hdf5 1.6.x modules. It also looks like the premade packages for 1.6.x you can download are all for gnu compilers, so I'll have to compile an ifort version myself, which should be no problem.
> 
> Cheers,
> Dave
> 
> 
> On 2013-10-02, at 12:22 PM, Dean Townsley <Dean.M.Townsley at ua.edu> wrote:
> 
>> Hi David,
>> 
>> From the page you link about Colosse, what might be most useful is if you gave the output of 'module avail' which should show what compilers, mpi stacks, and libraries are available.
>> 
>> My presumption would be that there would be an mvapich MPI stack based on intel compilers available, as that is typical on intel architectures with infiniband switches.  You may or may not need to build hdf5 yourself.
>> 
>> Later,
>> Dean
>> 
>> 
>> 
>> On 10/01/2013 09:07 AM, David wrote:
>>> Hi,
>>> 
>>> So Colosse is actually down for maintenance today, but I can check out some stuff on Guilimin. What kind of information is useful? It looks like it has gfortran and gcc for compilers.
>>> 
>>> uname -a gives
>>> 
>>> Linux lg-1r14-n04 2.6.18-308.24.1.el5 #1 SMP Tue Dec 4 17:43:34 EST 2012 x86_64 x86_64 x86_64 GNU/Linux
>>> 
>>> if knowing the Linux distribution is helpful.
>>> 
>>> They have hardware information here: http://www.calculquebec.ca/index.php/en/resources/compute-servers/colosse - Intel Xeon processors if that's important.
>>> 
>>> Anything else that would help?
>>> 
>>> Cheers,
>>> -David
>>> 
>>> On 2013-10-01, at 9:43 AM, John ZuHone <jzuhone at milkyway.gsfc.nasa.gov> wrote:
>>> 
>>>> Hi David,
>>>> 
>>>> I'm not aware of one, but could you give us some details on the machines? We might be able to suggest a similar machine for you to try modifying the Makefile.h.
>>>> 
>>>> Best,
>>>> 
>>>> John Z
>>>> 
>>>> On Oct 1, 2013, at 9:41 AM, David <david.john.williamson at gmail.com> wrote:
>>>> 
>>>>> Hello,
>>>>> 
>>>>> I'm looking at getting FLASH3 running on either Colosse or Guilimin, two of the clusters I've just recently got access to at Calcul-Quebec. I was wondering if there is an existing sitefile floating around anywhere. If there isn't, then no worries, I'll sort it out myself, but I figure there's no point in reinventing the wheel :)
>>>>> 
>>>>> Cheers,
>>>>> David Williamson
>>>> 
>>> 
>> 
> 
> 
> 
> 
> -- 
> Mark Richardson, 
> Mark.L.Richardson at asu.edu
> Ph.D. Candidate: Astrophysics
> ISTB4 623
> School of Earth and Space Exploration
> Arizona State University
> 480 318-4449
> www.public.asu.edu/~mlricha4

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://flash.rochester.edu/pipermail/flash-users/attachments/20131003/5756c319/attachment-0001.htm>