[FLASH-USERS] 'forced' output unavailable for restart

Mario Manuel mmanuel at umich.edu
Mon Oct 13 18:40:53 EDT 2014


Hi All,

I am trying to restart a simulation from a checkpoint file, and it is having problems restarting.

Here is the final lines of the log file:

  ==============================================================================
 [ 10-13-2014  18:19:34.989 ] [amr_set_runtime_parameters] NOTE: Enabling curvilinear suppport because of the selected geometry
 [ 10-13-2014  18:19:35.661 ] [gr_initGeometry] checking BCs for idir: 1
 [ 10-13-2014  18:19:35.663 ] [gr_initGeometry] checking BCs for idir: 2
 [ 10-13-2014  18:19:35.971 ] [io_readData]: type=checkpoint
 [ 10-13-2014  18:19:35.971 ] [io_readData]: name=/home/mmanuel/scratch/FLASH_Outputs/AblRTnoB_300GW/AblRTnoB_hdf5_chk_0064
 [ 10-13-2014  18:19:40.533 ] [io_readData] file_closed: type=checkpoint
 [ 10-13-2014  18:19:40.533 ] [io_readData] file_closed: name=/home/mmanuel/scratch/FLASH_Outputs/AblRTnoB_300GW/AblRTnoB_hdf5_chk_0064
 [ 10-13-2014  18:19:40.645 ] [GRID amr_refine_derefine]: initiating refinement
 [ 10-13-2014  18:19:40.666 ] [GRID amr_refine_derefine]: redist. phase.  tot blks requested: 5344
 [GRID amr_refine_derefine] min blks 87    max blks 90    tot blks 5344
 [GRID amr_refine_derefine] min leaf blks 66    max leaf blks 69    tot leaf blks 4009
 [ 10-13-2014  18:19:40.786 ] [GRID amr_refine_derefine]: refinement complete
 INFO: Grid_fillGuardCells is ignoring masking.
 [ 10-13-2014  18:19:45.707 ] [mpi_amr_comm_setup]: buffer_dim_send=100945, buffer_dim_recv=58431
 [ 10-13-2014  18:19:45.822 ] [gr_hypreInit]: HYPRE_RELEASE_NAME=hypre, HYPRE_RELEASE_VERSION=2.8.0b, HYPRE_RELEASE_DATE=2011/11/14
 [ 10-13-2014  18:19:46.583 ] [IO_writePlotfile] open: type=plotfile
 [ 10-13-2014  18:19:46.583 ] [IO_writePlotfile] open: name=/home/mmanuel/scratch/FLASH_Outputs/AblRTnoB_300GW/AblRTnoB_forced_hdf5_plt_cnt_


So it finds the correct checkpoint file in my output directory, but it is also looking for the ‘AblRTnoB_forced_hdf5_plt_cnt_’ file. This file does not exist. The only differences in my initial .par file and the one I’m using now for the restart is

plotFileNumber       = 0041			(instead of 0)
restart              = .true.				(instead of .false.)
checkpointFileNumber = 0064			(instead of 0)

Once the simulation starts up again, I’d like the next save files to be 0042 and 0065 for the plot and checkpoint, respectively. 

Is there some other flag I should be adding in the .par file? Any help is much appreciated!

Cheers,
Mario

______________________________________
                                                                                                                                
Dr. Mario Manuel
Einstein Postdoctoral Fellow, Smithsonian Astrophysical Observatory
mmanuel at umich.edu
617-899-8381

University of Michigan
Space Research Building
2455 Hayward Street
Ann Arbor, MI 48109
Office: 734-764-4585
______________________________________

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://flash.rochester.edu/pipermail/flash-users/attachments/20141013/edf71bb6/attachment.htm>


More information about the flash-users mailing list