[FLASH-USERS] FLASH crashing: "iteration, no. not moved"
Dominik Derigs
derigs at ph1.uni-koeln.de
Wed Mar 8 06:25:00 EST 2017
Hi Klaus,
Thank you for your messages.
Some answers to the question you mentioned:
> Are you using face variables?
No.
Does the same happen if you
> - use the older Paramesh implementation (setup with +pm40) ?
> - or, alternatively, set the following runtime parameters to .false. ?
> use_flash_surr_blks_fill
> use_reduced_orrery
I'll have to try this.
Is Paramesh trying to increase or to decrease the number of blocks when
> this happens?
It tried to increase by 4 blocks, these are the most recent messages:
[ 03-07-2017 01:59:00.137 ] [GRID amr_refine_derefine]: redist. phase.
tot blks requested: 26466
[...]
[ 03-07-2017 01:59:51.245 ] [GRID amr_refine_derefine]: redist. phase.
tot blks requested: 26470
(end of log file)
Have you made any unusual changes to Paramesh?
No.
In particular, is it still true that
> maxblocks_tr = 10*maxblocks
> (as per amr_initialize.F90) ?
Yes.
Meta-information has already been
> moved and modified at this point, under the assumption that movement of
> the contents of all blocks succeeds. it would be inconsistent if that last
> blocks then does not actually get moved.
I was afraid that this might have been the case.
I added the debug code you suggested in your follow-up mail and queued a
new simulation.
Best regards,
Dominik
2017-03-08 4:57 GMT+01:00 Klaus Weide <klaus at flash.uchicago.edu>:
> On Tue, 7 Mar 2017, Dominik Derigs wrote:
>
> > Dear FLASH users,
> >
> > I'm seeing a problem for quite some time on our local cluster which I
> don't
> > seem able to get rid of. Whenever I run a sufficiently large simulation,
> it
> > will fail sooner or later while paramesh writes this to the output:
> >
> > 45251 8.5418E-01 5.7059E-06 ( 7.080E-02, 8.350E-02, 0.000E+00) |
> > 5.706E-06
> > iteration, no. not moved = 0 4629
> > iteration, no. not moved = 1 3
> > iteration, no. not moved = 2 1
> > iteration, no. not moved = 3 1
> > iteration, no. not moved = 4 1
> > [...]
> > iteration, no. not moved = 98 1
> > iteration, no. not moved = 99 1
> > iteration, no. not moved = 100 1
> > ERROR: could not move all blocks in amr_redist_blk
> > Try increasing maxblocks or use more processors
> > nm2_old, nm2 = 1 1
> > ABORTING !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
>
> Hi Dominik,
>
> I have not encountered this problem myself.
>
> Please provide some more info about your setup.
> Some particular questions:
>
> Are you using face variables?
>
> Does the same happen if you
> - use the older Paramesh implementation (setup with +pm40) ?
> - or, alternatively, set the following runtime parameters to .false. ?
>
> use_flash_surr_blks_fill
> use_reduced_orrery
>
> Is Paramesh trying to increase or to decrease the number of blocks when
> this happens? (The long file may show this information, perhaps in a
> message like this:
> ... [GRID amr_refine_derefine]: redist. phase. tot blks requested: 453
>
> Have you made any unusual changes to Paramesh?
> In particular, is it still true that
>
> maxblocks_tr = 10*maxblocks
>
> (as per amr_initialize.F90) ?
>
>
> > Do you know how to prevent this error from happening or - if not - if it
> is
> > safe to remove the corresponding MPI_ABORT entirely and just work with
> one
> > block not being shifted around correctly?
>
> I do not think this would be safe. Meta-information has already been
> moved and modified at this point, under the assumption that movement of
> the contents of all blocks succeeds. it would be inconsistent if that last
> blocks then does not actually get moved.
>
> Klaus
>
>
--
Dominik Derigs
I. Physikalisches Institut
Universität zu Köln
Zülpicher Straße 77
50937 Köln
GERMANY
https://hera.ph1.uni-koeln.de/~derigs/
Tel. (+49|0) 221 470-8352
Fax. (+49|0) 221 470-5162
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