[FLASH-USERS] overwriting of snapshots
guido
g.granda at irya.unam.mx
Tue Nov 12 16:15:43 EST 2019
Hello,
I guess this happens because flash only allows snapshots numbers of 4
digits.
Cheers,
On 12/11/19 14:29, guido wrote:
> Hello Flash users,
>
> I found out that one simulation is overwriting the last snapshot
> instead of writing new ones. I think this very strange because this
> did not happen with previous snapshots.
>
> The code keeps writing the snapshot 9999 instead of creating the 10000
> one.
>
> The flash.par used for this simulation is the following:
>
> # Runtime parameters for a generic problem
> # check the online documentation for runtime parameter descriptions
> # or look at the setup_params file in the object directory for
> # descriptions of parameters specific to your simulation
>
> # Computational volume parameters
> # Grid parameters
> geometry = "cartesian"
> # Size of computational volume
> xmin = -10.0
> xmax = 10.0
> ymin = -0.6
> ymax = 0.6
> #zmin = -0.6
> #zmax = 0.6
> # Runtime Parameters
> sim_rho =1.0
> sim_vy =0.0
> sim_vz =0.0
> sim_by =0.0
> sim_bz =1.0 # this is just a factor
> sim_x_cent =0.0
> sim_y_cent =0.0
> sim_z_cent =0.0
> sim_p =1.0
> sim_cs =1.0 # check polytropic constant
>
> #sim_z_cent =0.0
> # Boundary conditions
> zl_boundary_type = "periodic"
> zr_boundary_type = "periodic"
> xl_boundary_type = "outflow"
> xr_boundary_type = "outflow"
> yl_boundary_type = "periodic"
> yr_boundary_type = "periodic"
>
> # Simulation (time, I/O) parameters
>
> cfl = 0.8
> basenm = "ha_iso_"
> stats_file = "ha_iso.dat"
> nend = 1000000
> tmax = 3.155760e14 #10 Myr
> dtinit = 1.0e-3 #e-3 Myr
> dtmax = 3.155760e12 #e-1 Myr
> dtmin = 3.155760e-70 #
>
> #to write a checkpoint when dt< dtmin
> dr_dtMinBelowAction = 1
>
> restart = .true.
> checkpointFileNumber= 188
> plotfileNumber= 941
> # checkpoint file output parameters
> checkpointFileIntervalTime = 3.155760e13 # 1Myr
> checkpointFileIntervalStep = 50
> # plotfile output parameters
> plotfileIntervalTime = 3.155760e12 #0.1 Myr
> plotfileIntervalStep = 10
>
> # variables to output to plotfiles
> plot_var_1 = "dens"
> plot_var_2 = "pres"
> plot_var_4 = "eint"
> plot_var_5 = "velx"
> plot_var_6 = "vely"
> plot_var_7 = "velz"
> plot_var_8 = "magx"
> plot_var_9 = "magy"
> plot_var_10= "magz"
>
> # small variables
> small = 1.0e-40
> smlrho = 1.0E-40
> smallp = 1.0E-22
> smalle = 1.0e-10
> smallt = 1.
> smallu = 1.0E-40
> smallx = 1.0E-10
> # logfile parameters
> run_comment = "harris current sheet"
> log_file = "ha_iso.log"
>
> # common eos parameters
> eintSwitch = 1.0E-4
> eosMode ="dens_pres"
>
> # AMR refinement parameters
> lrefine_max =6
> lrefine_min =6
> refine_var_1 = "dens"
> #delta_ref =0.01
> #delta_deref =-0.01
> #reference_density =2.12e-24 # unperturbed initial density
> refine_var_thresh = "dens"
> #USM parameters
> killdivb = .true. # default true
> flux_correct = .true.
> Nblockx = 1
> Nblocky = 1
> Nblockz = 1
>
> # === Polytropic EOS ===
> usePolytrope = .true.
> PolytropeDens1 = 0.0
> #PolytropeDens2 = 1e99
> #PolytropeDens3 = 1e99
> #PolytropeDens4 = 1e99
> #PolytropeDens5 = 1e99
> PolytropeGamma1 = 1.0
> #PolytropeGamma2 = 1.0
> #PolytropeGamma3 = 1.0
> #PolytropeGamma4 = 1.0
> #PolytropeGamma5 = 1.0
> PolytropeKonst = 1.0 # sound speed squared (cs^2)
>
> Do you see anything in my flash.par that might cause this error? I'm
> using flash 4.5 by the way.
>
> Kind Regards,
>
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