[FLASH-USERS] Unable to run for IO

[Naveen Yadav]

Dear Himakar,

You may find the discussion in this thread useful:

http://flash.uchicago.edu/pipermail/flash-users/2019-July/002968.html

Cheers
Naveen Yadav
Post-doctoral Researcher,
Max Planck Institute For Astrophysics,
Garching, Germany.

"The purpose of (scientific) computing is insight, not numbers" -- Richard
Hamming.


On Wed, Apr 28, 2021 at 11:10 PM Ganti, Himakar (gantihr) <
gantihr at mail.uc.edu> wrote:

> I am unable to run any simulation with IO. I am using the Docker
> container  *icksa/flash4-deps *with FLASH 4.6.2, with HDF5 1.8.11
>
> Configure option runs fine
>
> *$ ./setup Sedov --auto +noio*
>
> When running the 'make' command, the following is encountered:
>
> *$ make -j XX*
>
> returns the following after it starts compiling the objects:
>
> -L /usr/local/include/lib -lhdf5 -lz
> /usr/local/lib/libhdf5.a(H5PL.o): In function `H5PL_term_interface':
> H5PL.c:(.text+0xa7): undefined reference to `dlclose'
> /usr/local/lib/libhdf5.a(H5PL.o): In function `H5PL_load':
> H5PL.c:(.text+0x319): undefined reference to `dlsym'
> H5PL.c:(.text+0x45c): undefined reference to `dlopen'
> H5PL.c:(.text+0x475): undefined reference to `dlsym'
> H5PL.c:(.text+0x5a4): undefined reference to `dlclose'
> H5PL.c:(.text+0x629): undefined reference to `dlerror'
> H5PL.c:(.text+0x83c): undefined reference to `dlclose'
> collect2: error: ld returned 1 exit status
> make: *** [flash4] Error 1
>
> The simulation runs with +noio option, but no simulation (flow-domain
> files for visit) or plot files are generated in the *object *folder. Can
> anyone please help me with this?
>
> Sincerely,
> Himakar Ganti
> Doctoral Candidate | Multiphase Flow and Combustion Lab | Aerospace
> Engineering & Engineering Mechanics
>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://flash.rochester.edu/pipermail/flash-users/attachments/20210429/ff25eabd/attachment.htm>